Search Results for "clustering algorithm matlab"
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Showing 13 open source projects for "clustering algorithm matlab"
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sktime
A unified framework for machine learning with time series
sktime is a library for time series analysis in Python. It provides a unified interface for multiple time series learning tasks. Currently, this includes time series classification, regression, clustering, annotation, and forecasting. It comes with time series algorithms and scikit-learn compatible tools to build, tune and validate time series models. Our objective is to enhance the interoperability and usability of the time series analysis ecosystem in its entirety. sktime provides a unified... -
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HDBSCAN
A high performance implementation of HDBSCAN clustering
HDBSCAN - Hierarchical Density-Based Spatial Clustering of Applications with Noise. Performs DBSCAN over varying epsilon values and integrates the result to find a clustering that gives the best stability over epsilon. This allows HDBSCAN to find clusters of varying densities (unlike DBSCAN), and be more robust to parameter selection. In practice this means that HDBSCAN returns a good clustering straight away with little or no parameter tuning -- and the primary parameter, minimum cluster size... -
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PyArmadillo
linear algebra library for Python
PyArmadillo - streamlined linear algebra library for Python, with emphasis on ease of use. Alternative to NumPy / SciPy. * Main page: https://pyarma.sourceforge.io * Documentation: https://pyarma.sourceforge.io/docs.html * Bug reports: https://pyarma.sourceforge.io/faq.html * Git repo: https://gitlab.com/jason-rumengan/pyarma -
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QSdpR
Viral Quasispecies Reconstruction software based on QSdpR algorithm
This is a viral quasispecies reconstruction software for quasispecies assembly problem on mRNA viruses, which is based on a correlation clustering approach and uses semidefinite optimization framework. The software accepts a reference genome, a NGS read set aligned to this reference and set of SNP locations in the form of a vcf file and outputs an optimal set of reconstructed species genomes which describes the underlying viral population. -
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Unsupervised Random Forest
On-line Unsupervised Random Forest
This tool uses Random Forest and PAM to cluster observations and to calculate the dissimilarity between observations. It supports on-line prediction of new observations (no need to retrain); and supports datasets that contain both continuous (e.g. CPU load) and categorical (e.g. VM instance type) features. In particular, we use an unsupervised formulation of the Random Forest algorithm to calculate similarities and provide them as input to a clustering algorithm. For the sake of efficiency... -
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LWPR
Locally Weighted Projection Regression (LWPR)
Locally Weighted Projection Regression (LWPR) is a fully incremental, online algorithm for non-linear function approximation in high dimensional spaces, capable of handling redundant and irrelevant input dimensions. At its core, it uses locally linear models, spanned by a small number of univariate regressions in selected directions in input space. A locally weighted variant of Partial Least Squares (PLS) is employed for doing the dimensionality reduction. Please cite: [1] Sethu Vijayakumar... -
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avimmir
(audio, video, image) Multimedia Multimodal Information Retrieval
audio classification; speaker segmentation; speaker clustering; speaker recognition; spoken document retrieval; image retrieval; video retrieval; etc. -
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PocketAnalyzerPCA combines a geometric algorithm for detecting pockets in proteins with Principal Component Analysis and clustering. This enables visualization and analysis of pocket conformational distributions of large sets of protein structures.
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This is a fast C implementation of Arturo Camacho's SWIPE' pitch extraction algorithm. See the project homepage for more about the advantages of the SWIPE' algorithm. swipe-1.0.tar.gz contains the current source, which should compile quite neatly.
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nBoost is a suite of boosting algorithms designed to solve binary classification problems on data that is not linearly separable by a convex combination of base hypotheses, i.e. noisy data. WARNING: Active development. Underlying algorithm is unstable.
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UANA (Universal Abstract Numerical Algorithm) is a c++ api for developers to write algorithms independant of the underlying data container classes.
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This project collect several data mining methods, such as: 1) clustering methods; 2) biclustering methods; 3) FCA methods and etc.
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