Search Results for "aligner"

.... In its default implementation, it produces a human-readable CSV table associating tokens in text A with tokens in text B, and can also inject token-level annotation from text B to text A. The Aligner class on which the default implementation is based can be incorporated into more complex workflows.

... in both the GUI and as library functions. Training and test code for both the StoG and GtoS models. A SpaCy extension that allows direct conversion of SpaCy Docs and Spans to AMR graphs. Sentence to Graph alignment routines FAA_Aligner (Fast_Align Algorithm), based on the ISI aligner code detailed in this paper. RBW_Aligner (Rule Based Word) for a simple, single token to single node alignment.

InMethyl is a Python-based application for the design of target-specific primer combinations for PCR amplification and bisulfite sequencing of complete CpG-islands. InMethyl uses bowtie high-throughoutput aligner to identify potential mis-priming sites in the bisulfite treated or intact genome and then – undesirable potential PCR products. InMethyl provides a balance between various characteristics that allows to pick up primers in hard-to-study genomic regions. This balance is based...

The *Tree-to-Tree (t2t) Alignment Pipe* is a collection of python scripts, co-ordinating the process of automatic alignment of parallel treebanks from plain text files with a single call from a unix command line. Supported Languages: DE, FR, EN