Search Results for "ekho-data" - Page 91
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Showing 3594 open source projects for "ekho-data"
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Analysis software for Nbody/SPH or SPH simulations (e.g. performed with Gadget II). See http://sourceforge.net/apps/wordpress/hyplot/about and http://sourceforge.net/apps/trac/hyplot/wiki for more information.
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ChIP-RNA-seqPRO
ChIP-RNA-sequencing-processing (ChIP-RNA-seqPRO)
ChIP-RNA-seqPRO: A strategy for identifying regions of epigenetic deregulation associated with aberrant transcript splicing and RNA-editing sites. Runnable python scripts packaged together with customized annotation libraries, demo data input and README guide. 9/26 : v1.1 Updated MAIN_IV to debug error thrown by python pandas no longer supporting 'subset'. This code will no longer be actively maintained/updated here. A cloud-based resource for comparative analysis of epigenetic, sequence variation, and expression datasets is now available. Please visit the Cloudomics, project for cloud-based resources: https://sourceforge.net/projects/cloudomics-for-aws/ -
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PyRate
Bayesian Estimation of Speciation and Extinction from Fossil Data
PyRate is a Python program to estimate speciation, extinction, and preservation rates from fossil occurrence data using a Bayesian framework. The method was described by D Silvestro, J Schnitzler, LH Liow, A Antonelli, and N Salamin in Systematic Biology (http://sysbio.oxfordjournals.org/content/early/2014/02/08/sysbio.syu006.abstract). *Please download the most up-to-date code from the "PyRate code" tab on this page or from: https://github.com/dsilvestro/PyRate * *An updated manual can be found here: https://github.com/dsilvestro/PyRate/tree/master/tutorials * -
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ExAM-Exome_Analysis_And_Mining
A whole exome sequencing analysis package and its graphical interface
During the past few years, whole exome sequencing has imposed itself for genetic research, largely due to its use for detection of causative mutations responsible for Mendelian disorders. As a consequence of their power and of the rapidly decreasing cost of these technologies, massive amount of exome sequencing data are generated and becoming available to a broadening community of scientists. However, these data remain difficult to analyze and interpret by the general scientific community, due to the limited bioinformatics resources that are currently freely available for their analysis and the partial information that they provide. Here, we present an interactive and free analysis package, ExAM, dedicated to whole exome sequencing data analysis. ... -
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The MeVisLab Community project provides add-on modules that extend the functionality of the MeVisLab software. The modules are provided and maintained by the MeVisLab developer community and can be compiled with the public MeVisLab SDK.
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pyDxCluster
pyDxCluster is python (tk) HAM Dx Cluster for Linux users
pyDxCluster is python (tk) HAM Dx Cluster for Linux users Feautres: - connect to any cluster server - connect to any reverse beacon server - connect to PSKReporter server - send spot - band selecting - send/receive data (callsign, frequency) to/from FlDigi with fldigi-shell - send command to cluster - save all data to config (host, port,username,password, bandselections, QRZ .com username and password, and alll window positions) - if you registred qrz.com, Qrzcq.com or hamqth.com user, puit the username and password to Entry's, and view on "Detailed view" window all data from spots... -
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RAMBO-K
Read Assignment Method Based On K-mers
RAMBO-K is a tool for rapid and sensitive removal of background sequences from Next Generation Sequencing data. Please cite our publication (http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0137896) if you use RAMBO-K. We moved to GitLab, please visit our homepage for latest development. The latest stable versions of RAMBO-K will still be provided here. -
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iTag
Tag images using various categories and modifiers
...Users are able to load a series of Images into a session and add tags on objects on these images within previously defined categories and modifiers. Upon ending the session, result files are produced including (if provided by the EXIF data) the gps information for each Picture, the number of objects in each category and a detailed result file that describes each individual object. In addition, all images that were tagged are saved. -
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dotCODES_Source_Control_for_VS
The dotCODES Source Control Maintenance Mainframe (SCM2)
The dotCODES Source Control Maintenance Mainframe for Visual Studio is an administrator console application for developing dotCODES components. Built upon a Python foundation, the program is used to create data center routines (Unix packages) and maintain enterprise cloud services (CGI scripts/Apache) by means of building dotCODES runtimes and deploying them to and from the client server. -
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mysql2sqlite
converts mysql database to sqlite database using php, pdo or exe
Convert a mysql database to a Sqlite database. Includes two projects : A) A php script B) A windows executable, based on a python script Converts data, indexes and foreign key constraints. About the php script : -don't need a lot of memory -good speed Was projected to use on VDS/VPS. Usage: wget https://sourceforge.net/projects/mysql2sqlite/files/mysql2sqlite/download chmod +x mysql2sqlite ./mysql2sqlite About the Windows executable and the Python script : Usage : edit the in i file to fit your system, and just run the exe or the python script. -
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SNMP Simulator is a software that would act like a multitude of real physical devices from SNMP Manager's point of view. Simulator builds and uses a database of physical devices' SNMP footprints to respond like their real counterparts do. Project moved to GitHub: https://github.com/etingof/snmpsim
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MyBeggar
Help to manage current docs (small DMS)
...When you want to find it, a short research will provide all documents links with provided parameters . You just have to double click on the result, and the system will open it with appropriate software. There is a benefit with this software: you can share data between few different computers and it's available from different OS. By example, you place db and archive directory in shared place, and you can manage it from different computer. (Linux package doesn't work for now, i'm worknig on it) Thanks to let a revie -
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ASN.1 types and codecs (BER, CER, DER) implementation in Python programming language. A collection of various ASN.1-based protocols data structures is supplied in a dedicated Python package. Project moved to GitHub: https://github.com/etingof/pyasn1
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dbis
DBIS Reference Implementation
Reference implementation of Directory-Based Information Services, described in IETF Internet Drafts, intended to replace NIS and RFC2307. -
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ipcvis
Visualize Inter Process Communication
Small python script that can visualize Inter Process Communication on Linux. It can create a graph of TCP and Unix sockets, pipes and also process hierarchy. Short (59 sec) demo visualizing ssh client connecting to ssh server on the same Ubuntu host: http://youtu.be/8XFKwzkexQY Longer (2 min 13 sec) demo visualizing ZoneMinder surveillance solution operation (stopping, starting, enabling and viewing camera): http://youtu.be/kM7klE61Ibk Tested on Ubuntu 14.10 and Debian... -
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ElastAlert
Easy and flexible alerting with ElasticSearch
...Alerts link to Kibana dashboards. Aggregate counts for arbitrary fields. Combine alerts into periodic reports. Separate alerts by using a unique key field. Intercept and enhance match data. Additional rule types and alerts can be easily imported or written. -
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Data analysis for ADEXL
Create Excel reports from results of Cadence ADE-XL simulations
*** Required files from "Excel COM API for Python" project *** The scripts allows post processing of data saved in CSV format from "Detail - Transposed" view of ADE-XL -
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Based on PyQwt (plotting widgets for PyQt4 graphical user interfaces) and on the scientific modules NumPy and SciPy, guiqwt is a Python library providing efficient 2D data-plotting features (curve/image visualization and related tools) for interactiv
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Admin UI for a Field Observation Server
Vbox machine for server_admin
Administrative User Interface for a Field Observation Server: It's a administrative web app built with Django for storing citizen science data and has support for uploading the collected data to an RESTful archive server. It has features including (1) registration of contributors; (2) a new GUI to allow scientists with minimal computer knowledge to add, sort, and delete observations; (3) support for uploading a photo to a specific observation; (4) support for displaying GPS information in a map field; (5) support for validating the correctness of the format of the observation data; (6) support for uploading a selected subset of observation data via Internet to a private server for preservation. ... -
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WxBinTerminal
Serial Com Terminal for Hexadecimal, decimal, or ascii formats
wxBinTerm, a binary serial terminal ------------------------------------------------------------------ V1.0.0 initial release, ... This serial terminal is initially made to send parameters to Reiner Serial Printer JetStamp 791. It is able to send data in HexaDecimal/Decimal/ASCII format on serial com port. you can use it for anythink else. you can add/change some presetted commands modifying wxBinTermCommands.py dictionnary written in python 2.7.9 : https://www.python.org/ need pyserial : http://sourceforge.net/projects/pyserial/ need wxpython : http://www.wxpython.org/ Gui build with wxFormBuilder (but not need to execute) : http://sourceforge.net/projects/wxformbuilder/ tested on Linux, WinXP, Win7 copyright 2015 Jean Ingrasciotta ginoingras@gmail.com -
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TinkerCell is a software for synthetic biology. The visual interface allows users to design networks using various biological "parts". Models can include modules and multiple cells. Users can program new functions using C or Python. www.tinkercell.
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anontwi
AnonTwi: tool to have more privacy on social networking sites related
AnonTwi provides you: + AES + HMAC-SHA1 encryption on Tweets and Direct Messages + Secure Sockets Layer (SSL) to interact with API + Proxy Socks (for example, to connect to the TOR network) + Random HTTP header values + Send long messages splitted automatically + Automatic decryption of tweet's urls or raw inputs + Backup messages to your disk (max: 3200) + Send fake geolocation places + Remove data and close account (suicide!) + View global Trending Topics + UTF-8 + Unicode support (chinese, arabic, symbols, etc) + Multiplatform: GNU/Linux, MacOS, Win32 + Detailed colourful output results + Generate tools and modules + GTK+ interface + An IRC bot slave + [...] Contribute: - Bitcoin: 1Q63KtiLGzXiYA8XkWFPnWo7nKPWFr3nrc - Ecoin: 6enjPY7PZVq9gwXeVCxgJB8frsf4YFNzVp Contact: - irc.freenode.net (channel: #AnonTwi) -
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UV-CDAT
Ultrascale Visualization Climate Data Analysis Tools
Ultrascale Visualization Climate Data Analysis Tools (UV-CDAT), is a powerful and complete front-end to a rich set of visual-data exploration and analysis capabilities well suited for climate-data analysis problems. -
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Diet BOINC Screensaver Module
Lightweight alternative to XScreenSaver's boincscr screensaver module
Diet BOINC is a no-graphics, lightweight alternative XScreenSaver module for the boinscr screensaver. If the Boinscr module in XScreenSaver is showing a black screen with the words 'boinc not running' or similar, Diet BOINC may be able to replace it with a working alternative. For Linux only Dependencies: - XScreenSaver - BOINC software - Python 2.x Tested in CentOS & Ubuntu Linux. Should work in other Linux if you can run these three items. -
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...We are creating a unified description of the NIF file format allowing our contributors to build tools and utilities, to facilitate user created content. The tools will allow users to: - View/Edit/Visualise the data of a NIF model. - Libraries to Read/Write the NIF Format. - Import/Export NIF models into various 3D package via Plug-ins. - Custom content creation for NetImmerse/Gamebryo Games.