Search Results for "structural analysis software" - Page 9
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Showing 395 open source projects for "structural analysis software"
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pivottablejs
Drag’n’drop Pivot Tables and Charts for Jupyter/IPython Notebook
PivotTable.js is a Javascript Pivot Table and Pivot Chart library with drag-drop interactivity, and it can now be used with Jupyter/IPython Notebook via the pivottablejs module. I first built PivotTable.js with a plan to build an in-browser data analysis tool, and got as far as one where you could load up a CSV file in the browser for display. Since then, however, the Jupyter project has gathered steam and now provides a browser-based interface to some of the most powerful data processing... -
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Intel neon
Intel® Nervana™ reference deep learning framework
neon is Intel's reference deep learning framework committed to best performance on all hardware. Designed for ease of use and extensibility. See the new features in our latest release. We want to highlight that neon v2.0.0+ has been optimized for much better performance on CPUs by enabling Intel Math Kernel Library (MKL). The DNN (Deep Neural Networks) component of MKL that is used by neon is provided free of charge and downloaded automatically as part of the neon installation. The gpu... -
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SmartMuseum
Software for work with Corpus of Everyday life history Sources
...In this project, we consider the problem of creating software infrastructure for collaborative semantic annotation, information relation, and personalized access to corpus of everyday life history sources. Project financially supported from Department for Humanities of Russian Fund for Basic Research according to project # 16-01-12033. Authors: Vdovenko A., Marchenkov S., Petrina O., Korzun D. -
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Open-source Python software library and GUI desktop environment for direct bioinformatic analysis of mass-spectrometry data through powerful scripting tools and interfaces to many machine data formats, database search engines, and peptide data formats. For a copy of the source code, check out our Github repositories: mzDesktop: https://github.com/MaxAlex/mzDesktop multiplierz: https://github.com/MaxAlex/multiplierz
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Collaborative Computing Project for NMR
Collaborative Computing Project for NMR (CCPN)
The Collaborative Computational Project for NMR (CCPN) provides tools and knowledge to maximise the impact of the biological NMR studies. The CCPN software facilitates data analysis and software integration. The project actively promotes the exchange of knowledge and provides training and best practices for the NMR community. CCPN also has a leading role in the development of a NMR data-sharing standard and coordination of NMR instrumentation proposals for RCUK and BIS. The 28 partners of CCPN jointly cover all aspects of biomolecular NMR and together they promote excellence in science in their respective fields. -
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Needle
The iOS Security Testing Framework
Needle is an open-source, modular framework to streamline the process of conducting security assessments of iOS apps. Needle was originally made to work with iOS 9 and iOS 10. Since then, Frida was released and become the defacto tool to use with mobile security assessments. Some common Frida mobile security scripts were later implemented within Needle, as some of these scripts worked better or addressed some issues that were present in Needle's custom tooling. Assessing the security of an... -
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nmr-nessy
NMR relaxation dispersion spectroscopy analysis software
NESSY is an open source software to analyse NMR relaxation dispersion data of either CPMG or R1p (R1rho) dispersion experiments. The graphical interface enables simple management of large experimental data sets and simple and automated analysis. NESSY automatically calculates effective transverse relaxation rate (R2eff) and performs model selection between different relaxation dispersion models. -
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DSTK - DataScience ToolKit
DSTK - DataScience ToolKit for All of Us
DSTK - DataScience ToolKit is an opensource free software for statistical analysis, data visualization, text analysis, and predictive analytics. Newer version and smaller file size can be found at: https://sourceforge.net/projects/dstk3/ It is designed to be straight forward and easy to use, and familar to SPSS user. While JASP offers more statistical features, DSTK tends to be a broad solution workbench, including text analysis and predictive analytics features. ... -
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Password Guessing Framework
A Framework for Comparing Password Guessing Strategies
...Therefor, it gathers information about how many passwords from an input file (password leak) have been cracked in relation to the amount of generated guesses. Subsequent to the guessing process an analysis of the cracked passwords is performed. In general though, any guesser that prints the password candidates via STDOUT can be used with the framework. The aforementioned password guessing / password cracking software is not part nor shipped with the framework and need to be installed separately. -
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To create an Open Source and Free solution for the analysis of woven fabric stuctures. Included will be the ability to view the weave structure in 2D, 3D and profile as well as print and save the drafts (patterns).
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X-SOCS
X-ray Strain Orientation Calculation Software
The X-ray Strain Orientation Calculation Software (X-SOCS) is a user-friendly software, developed for automatic analysisof 5D sets of data recorded during continuous mapping measurements. X-SOCS aims at retrieving strain and tilt maps of nanostructures, films, surfaces or even embedded structures. For more information: http://scripts.iucr.org/cgi-bin/paper?S1600576714004506 To download the latest version of XSOCS (D. -
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node2vec
Learn continuous vector embeddings for nodes in a graph using biased R
The node2vec project provides an implementation of the node2vec algorithm, a scalable feature learning method for networks. The algorithm is designed to learn continuous vector representations of nodes in a graph by simulating biased random walks and applying skip-gram models from natural language processing. These embeddings capture community structure as well as structural equivalence, enabling machine learning on graphs for tasks such as classification, clustering, and link prediction.... -
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IOA AM code
Implementation of the core routine for AM analysis from the IOA AMWG
...It is written in the Python language which is freely available. V1.5 is compiled for Windows (XP onwards). The responsibility for the correct implementation and application of the software or any modification thereof rests with the end user. It should not be taken as agreement from the IOA or the AMWG that any results produced by this code are recommended or agreed. The example software does not represent an analysis method and requires correct inputs parameters and data, and interpretation of the results. All users should have a suitable understanding of the IOA AMWG document on which this code is based. ... -
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PBSuite
Software for Long-Read Sequencing Data from PacBio
This currently hosts two projects created and maintained by Adam English. PBJelly - the genome upgrading tool. PBHoney - the structural variation discovery tool Both are contained within the PBSuite code found in downloads. ----- PBJelly ----- Read The Paper http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0047768 PBJelly is a highly automated pipeline that aligns long sequencing reads (such as PacBio RS reads or long 454 reads in fasta format) to... -
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GoodCrypto private server
Secure mail + Tor gateway
Protect your company's email and browsing with your GoodCrypto private server. * Protects email metadata and resists traffic analysis * Automatic encryption, decryption, and key management * All private keys stay on *your* server * Users don't change their email or browser software * Blocks web malware * Runs on your private server * Completely decentralized -
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The Software Testing Automation Framework (STAF) is a framework designed to improve the level of reuse and automation in test cases and test environments. The goal of STAF is to provide a complete end-to-end automation solution for testers.
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This project houses software to analyze data acquired from electrophysiology experiments. Currently, we have an Octave/MATLAB program to analyze electroneurogram traces of coupled oscillators, and a Perl library for the analysis of voltage trace data
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pyEBSD-GUI
A free software to post-process EBSD data.
pyEBSD-GUI is a free software to post-process Electron Backscatter Diffraction (EBSD) data, inducing IPF mapping, image quality mapping, phase mapping etc, plotting pole figure, data segmentation, statistic analysis of the misorientation distribution etc. The software is written by python, and it supports both script and graphic user interface (GUI). -
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DirDiff
Python 2.7 script, analyzing 2 directories for differences.HTML output
Comparing two different versions of a directory with text files of any kind has never been easier. Detects deleted files, new files, files with changed name but same content and of course a side-by-side / line-by-line comparison of changed files. Number of context-lines is configurable. Here's, how to call it: >python DirDiff.py dir1 dir2 output.html or >python.exe DirDiff.py -l 3 -v olddir newdir dirdiff.html -l is the number of context lines in the side-by-side comparison. -v... -
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Libre Mechanics
Open Knowledge on engineering development.
Libre Mechanics it’s an Open Knowledge project created to offer a useful platform of information related with the development and research of Mechanical Engineering themes and similar fields, higly related with the use of Open Source and Software Libre tools. Here you will find a wide variety of projects, publications and scientific material available as references for developing their own projects, also guides and tutorials that allow you to take advantage of free software tools available today. The four principal lines of work are: Design Analysis and Simulation Automation and Robotics Development -
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BioC
We describe a simple XML format to share text documents and annotation
A minimalist approach to share text documents and data annotations. Allows a large number of different annotations to be represented. Project files contain: - simple code to hold/read/write data and perform sample processing. - BioC-formatted corpora - BioC tools that work with BioC corpora BioC goals - simplicity - interoperability - broad use - reuse There should be little investment required to learn to use a format or a software module to process that format. We are... -
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Biskit is a python library for structural bioinformatics research. It simplifies the analysis of macromolecular structures, protein complexes, and molecular dynamics trajectories and offers a platform for the rapid integration of external programs. PLEASE NOTE: The Biskit source code as well as any later releases are now hosted on https://github.com/graik/biskit The sourceforge repo is only kept here for reference.
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LOOS
Analyze molecular simulation data
LOOS is a light-weight object oriented software library for creating new tools for analyzing molecular simulation data, written in C++. The main design goal is to allow casual programmers to easily implement new analysis methods. THIS PAGE IS NO LONGER UPDATED. Please see https://github.com/GrossfieldLab/loos for all recent developments -
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FAST Simulations
An Open source Analysis and SImulation Toolbox for Fuel Cells
FAST is an Analysis and Simulation Toolbox (FAST) for Fuel Cells (FC) FAST-FC is the doctorate work of David B. Harvey and was developed with support from the U.S. DOE, Ballard, and Queen's University. Derivative works of FAST-FC include FC-APOLLO which is a forked branch of this project intended to capture the code state at the exit of the funded DOE project. FAST-FC is the open and active community branch. FAST-FC is developed and maintained by the original creator and... -
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Gitinspector
The statistical analysis tool for git repositories
Gitinspector is a statistical analysis tool for git repositories. The default analysis shows general statistics per author, which can be complemented with a timeline analysis that shows the workload and activity of each author. Under normal operation, it filters the results to only show statistics about a number of given extensions and by default only includes source files in the statistical analysis. This tool was originally written to help fetch repository statistics from student projects...
