Search Results for "analyze" - Page 9
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Showing 254 open source projects for "analyze"
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Protospacer
Rapid gRNA design and validation for CRISPR
Sign up to our mailing list at http://www.protospacer.com/contact.html. Protospacer allows researchers to build, analyze, and share their own database of CRISPR target-sites. This enables the development of custom libraries and helps to transfer the CRISPR technology to new organisms. Each Protospacer database is a simple catalogue of all possible Cas9 target-sites within a given FASTA sequence, i.e. all NGG/NAG sites. Protospacer then allows the user to sub-select targets from the database by gene ID, by exon/intron/UTR location, by sequence similarity, or by genomic co-ordinate. ... -
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Domain Analyzer Security Tool
Finds all the security information for a given domain name
Domain analyzer is a security analysis tool which automatically discovers and reports information about the given domain. Its main purpose is to analyze domains in an unattended way. -
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GHydraulics
Create EPANET models in QGIS
Open Source Hydraulic Network Analysis Software. A plug-in for Quantum GIS (QGIS) that allows you to create EPANET hydraulic analysis models. EPANET is a popular open source software to analyze water supply networks. -
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caplib
Correct, translate and analyze combinatorial library sequencing data
Originally developped to handle PacBio CCS data for an AAV capsid library. This program will extract, correct, translate and analyze the sequencng data, starting from the CCS fastq file. -
MongoDB Atlas runs apps anywhereMongoDB Atlas gives you the freedom to build and run modern applications anywhere—across AWS, Azure, and Google Cloud. With global availability in over 115 regions, Atlas lets you deploy close to your users, meet compliance needs, and scale with confidence across any geography.
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ctqa-cp
Automatic analysis of CT images of the CatPhan600/504 phantom
...The software currently only supports analysis of CT-images of the CatPhan600? phantom. Other phantoms may be supported upon request. The purpose of CTQA-cp is twofold: 1) To handle and analyze image sets consisting of a few thousand images that is commonly obtained from image quality assurance protocols on CT scanners. 2) Easily provide results that can be copied to your favorite word or spreadsheet processor, or be saved to disk. -
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AbMining ToolBox
python scripts to analyze antibody libraries
02-14-2014. Hamming distance calculation has been updated. These are python scripts to analyze antibody libraries sequenced by next generation sequencing methods (454, Ion Torrent, MiSeq) as described in D'Angelo et al MAbs. 2014 Jan 1;6(1):160-72. -
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allink
Software for data analysis, image processing, simulations, solver.
...Matematica) performs math operations on vectors and matrices for smoothing, interpolation, convolution, image processing... VarData) manipulate a structure of points connected by links. Addraw) openGL engine. ElPoly) analyze mechanical properties of polymer and membrane like structures. Addyn) perform molecular dynamics and Monte Carlo simulations and has a solver for 4th oder PDE. Avvis) perform all the operation of Matematica on different sets of data visualized on a Qt graphical interface. DrImage) image manipulation on the Matematica filters. ... -
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dna-barcode
Find and analyze barcodes in DNA sequence files
Find and analyze barcodes in DNA sequence files -
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VisualRiSC
Toolbox visualizing computations of Realizable Sign Conditions.
This toolbox contains a set of Python procedures in order to compute examples associated with the computation of Realizable Sign Conditions (RiSC) due to the approach by Basu, Pollack and Roy. The RiSC approach is a way to solve and analyze systems of polynomial equations and inequalities over the real numbers in the field of real-algebraic geometry. The involved computations often consist of highly sophisticated notions, not easy to illustrate by hand. VisualRiSC provides implementations of such notions and functions using the Python package SymPy, on the one hand, and an interface to Gnuplot in order for a visualization of examples using the Python package Gnuplot.py. -
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TexLexAn is an open source text analyser for Linux, able to estimate the readability and reading time, to classify and summarize texts. It has some learning abilities and accepts html, doc, pdf, ppt, odt and txt documents. Written in C and Python.
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Zero Wine Tryouts
An open source malware analysis tool
Zero Wine Tryouts is an open source malware analysis tool. Just upload your suspicious file (e.g. Windows executable file, PDF file) through the web interface and let it analyze. For more information, please visit project website: http://zerowine-tryout.sourceforge.net/ -
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X-Freq
X-Ray Reflectivity Frequency Analysis
Analyze the thicknesses of a sample from an x-ray reflectivity dataset using Fourier Transform techniques. -
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WindMeasuring is a handy and easy to use application designed to record data from Thies Clima ultrasonic anemometers. WindMeasuring displays information about the wind speed, direction and the virtual temperature. It features data logging of the saved data and uses COM port connections.
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A GUI applet that helps analyze the result of Kerala SSLC examination. All you need to input is the school code which generates the result report in PDF
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dAnalytics
dAnalytics is a software made for education in discriminant analysis.
...It's a very simple calculator over bi-dimensional populations. You input a file with two columns (one for each variable) and tryout different separations of populations (blue and red) and analyze it's efficiency by observing the eigen value result for the attempted separation. It also gives many information about the statistics both of the input and the separated populations. There's a documentation folder in the software which brings a quick start guide for this software. -
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GWA_2013
Open Source Geographical Wifi Analyser Tool
GWA Geographical Wifi Analyser is an open source software that will let you perform site survey. It's free for both personal and commercial use. It's the perfect choice for those who want to analyze their Wifi coverage and measure data rates.This latest version is only compatible with Linux. If you have any questions about using this program. -
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caseGen
... [BATCH], [ANALYZE] and [OPTIMIZE] cases in OpenFOAM and others
'caseGen' allows you to simplify your numerical simulation problem! Actual its not fairly tested so please contact me if you see any refinements or found bugs. -
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metaProt
Pipeline to analyze coding regions in metagenomic projects
metaProt is a python pipeline to analyze and extract data from protein sequences found in metagenomic projects. It integrates several existing tools (HMMer, Pepstats, Blast...) to be used against custom databases. Please, read the README.txt file to find more about this. -
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PyCDep is a tool to analyze include dependencies between files in C and C++ programs. PyCDep itself is written in python. It dumps all the facts in a prolog database which can be queried. Visualization is possible by dumping graphviz (.dot) files.
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BinScan is a graphical tool to analyze the library dependencies of binaries. It integrates both tools "ldd" and "nm" into a single GUI frontend. it displays the library dependencies of executables and the symbols it references in shared libraries
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This is a Content Based Image Retrieval Interface with only color features implemented. This is part of a thesis work to analyze the different color features and observe the performance on mainly corel5k images.
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Echoproc is a piece of scientific analysis software used to extract physical ice sheet characteristics from radio echograms from experiments like the Center for the Remote sensing of ice sheets (https://www.cresis.ku.edu/)
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A command line tool that allows you to (live) analyze netfilter (iptables) log files. It provides a nice output and has features like displaying hostnames, duplicate detection... More info (+ screenshots) can be found in the pdf inside the tarball.
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Zero Wine is a malware's behavior analysis tool. Just upload your suspicious PE file (windows executable) through the web interface and let it analyze the behaviour of the process.
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Patch file shows difference in files in whole lines. Sometimes those lines are very similar, only one or two words changed. This script compares changed lines by characters and highlights actual differences in them - very helpful with long lines.
