Search Results for "ekho-data" - Page 85
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Showing 3594 open source projects for "ekho-data"
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better-exceptions
Pretty and useful exceptions in Python, automatically
Pretty and more helpful exceptions in Python, automatically. While using better_exceptions in production, do not forget to unset the exceptions variable to avoid leaking sensitive data in your logs. If you do not see beautiful exceptions, first make sure that the environment variable does exist. On Linux and OSX, the export command does not add the variable permanently, you will probably need to edit the ~/.profile file to make it persistent. On Windows, you need to open a new terminal after the setx command. -
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PyAIMLng
The Next Generation of Python AIML Interpreter
A Python AIML interpreter with non-compliant extensions. PyAIMLng is an interpreter for AIML (the Artificial Intelligence Markup Language), forked from Cort Stratton's PyAIML. PyAIMLng adds additional features which are not part of the AIML 1.0.1 specification in order to provide the bot master with a rich set of tools from which to build a more believable AIML bot. -
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GPSpvt
Reading Position, Velocity, Time from a GARMIN GPS via native USB
...Tested on device 'GARMIN GPSmap 76CSx' (marine-type, handheld GPS), which has the Garmin GPS Product_ID: 292, and Garmin GPS SoftwareVersion: 3.90, and has lsusb info: 'ID 091e:0003 Garmin International GPS (various models)'. GPSpvt will probably run on most Garmin GPS with USB port, and print out device info. But to get viable PVT data, the GPS must support A800 protocol / D800 datatype. For reference see the document: 'Garmin Device Interface Specification, May 19, 2006, May 19, 2006, Drawing Number: 001-00063-00 Rev. C' (file: Garmin Device Interface Specification (May 19, 2006).pdf). Make sure the kernel module 'garmin_gps' is *NOT* loaded; otherwise USB is blocked! ... -
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PPLine
SNP calling, annotation and gene/transcripts expression quantification
PPLine is a Python-based suite aimed to process raw RNA-seq or Exome-seq data. PPLine provides: - read mapping (STAR/Tophat2/bowtie/bowtie2), including novel splice junsctions discovery - gene and transcript expression estimation (HTSeq-count/Cufflinks) - SNP calling with BQSR and indel realignment (samtools/GATK) - variant annotation (Annovar) - novel transcripts discovery (Cufflinks) - predicting proteotypic peptides and creating ref/alt proteins fasta-database - integration of the results -
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ParaCrypt
more convenient one-time-pad encryption.
ParaCrypt is software for encrypting and decrypting data with one-time-pads. For convenience the one-time-encryption-pads are created using pre-shared unencrypted files as sources of entropy. -
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lr2rmats
Long read to rMATS
lr2rmats is a Snakemake-based light-weight pipeline which is designed to utilize both third-generation long-read and second-generation short-read RNA-seq data to generate an enhanced gene annotation file. The newly generated annotation file could be provided to rMATS for differential alternative splicing analysis. More information can be found at https://sourceforge.net/p/lr2rmats/wiki/Home/ -
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Tangent
Source-to-source debuggable derivatives in pure Python
Existing libraries implement automatic differentiation by tracing a program's execution (at runtime, like PyTorch) or by staging out a dynamic data-flow graph and then differentiating the graph (ahead-of-time, like TensorFlow). In contrast, Tangent performs ahead-of-time autodiff on the Python source code itself, and produces Python source code as its output. Tangent fills a unique location in the space of machine learning tools. As a result, you can finally read your automatic derivative code just like the rest of your program. ... -
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DualTranscriptDiscovery
Transcript-discovery approach for gene feature delimitation by RNA-seq
This project contains Python scripts usable for a dual transcript-discovery approach that improves the delimitation of gene features from RNA-seq data in the chicken model. Documentation: http://bio.biologists.org/content/biolopen/suppl/2018/01/17/bio.028498.DC1/BIO028498supp.pdf Citation: Orgeur M., Martens M., Börno S. T., Timmermann B., Duprez D. and Stricker S. (2018). A dual transcript-discovery approach to improve the delimitation of gene features from RNA-seq data in the chicken model. ... -
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WikiSQL
A large annotated semantic parsing corpus for developing NL interfaces
A large crowd-sourced dataset for developing natural language interfaces for relational databases. WikiSQL is the dataset released along with our work Seq2SQL: Generating Structured Queries from Natural Language using Reinforcement Learning. Regarding tokenization and Stanza, when WikiSQL was written 3-years ago, it relied on Stanza, a CoreNLP python wrapper that has since been deprecated. If you'd still like to use the tokenizer, please use the docker image. We do not anticipate switching... -
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ELINT Alchemist
Plot, analyse and measure ELINT Time-Based data.
This program will open an ELINT Time-Based Data (TBD) file and plot it for purposes of measurement and analysis. Test files included. New ver 0.4 added 2018-01-01. -
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redfish-lab
Get started with the Redfish RESTful API from the DMTF
Redfish-lab allows a smooth ramp-up with the Redfish RESTful API on an HPE ProLiant server, including UEFI/BIOS configuration with various scripting languages like PowerShell and Python. Small tutorials/articles are also proposed in the Wiki section. -
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AI learning
AiLearning, data analysis plus machine learning practice
We actively respond to the Research Open Source Initiative (DOCX) . Open source today is not just open source, but datasets, models, tutorials, and experimental records. We are also exploring other categories of open source solutions and protocols. I hope you will understand this initiative, combine this initiative with your own interests, and do what you can. Everyone's tiny contributions, together, are the entire open source ecosystem. We are iBooker, a large open-source community,... -
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Gigatrees Statistics to Excel
Export Statistics Data from Gigatrees to Excel
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leet
Leet is CCEx's software application for on-the-fly encryption (OTFE).
...The goal of leet however is to be simpler and as user friendly as possible, making encryption and securing of information accessible to anybody, even those who don't necessarily have any prior knowledge of data securing, algorithms and encryption. However it's not targeted at this group of users only, part of the ambition of this project is to reach companies, institutions, governments (etc...) as well. -
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DC/OS
DC/OS - The Datacenter Operating System
DC/OS (Datacenter Operating System) is an open-source distributed operating system based on the Apache Mesos kernel. It abstracts a cluster of machines into a single logical computer, simplifying the deployment and management of containerized applications and services. DC/OS provides a comprehensive platform for running modern applications with features like container orchestration, service discovery, and scalability. -
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pyCGNS
A Python package for CGNS
pyCGNS is now on github: https://pycgns.github.io/index.html https://github.com/pyCGNS/pyCGNS -
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Open-source Python software library and GUI desktop environment for direct bioinformatic analysis of mass-spectrometry data through powerful scripting tools and interfaces to many machine data formats, database search engines, and peptide data formats. For a copy of the source code, check out our Github repositories: mzDesktop: https://github.com/MaxAlex/mzDesktop multiplierz: https://github.com/MaxAlex/multiplierz
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Spectral-SpecPro
Spectral - software for manipulating optical spectroscopy data
Spectral-SpecPro helps with the manipulation of optical spectroscopy data. Spectral takes files produced by Jasco instruments (uv-vis absorbance, fluorescence, circular dichroism readings as a function of wavelength, temperature, or time) and facilitates basic operations such as unit conversion (CD spectra), conversion into the format taken by CDPro (estimation of secondary structure; CD spectra), scatter correction (absorbance spectra), smoothing, re-sampling of the x-axis, and generic combination (sum, product, average, standard deviation) of multiple curves. ... -
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This program displays Eternal Lands maps and user game data and allows the user to navigate the maps using map links. Eternal Lands is a FREE MMORPG (massively multiplayer online role playing game). See http://www.eternal-lands.com/
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auto_ml
Automated machine learning for analytics & production
...Here's an example that includes serializing and loading the trained model, then getting predictions on single dictionaries, roughly the process you'd likely follow to deploy the trained model. Before you go any further, try running the code. Load up some data (either a DataFrame, or a list of dictionaries, where each dictionary is a row of data). Make a column_descriptions dictionary that tells us which attribute name in each row represents the value we’re trying to predict. Pass all that into auto_ml, and see what happens! You can pass in your own function to perform feature engineering on the data. -
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i-Map - Plot Geolocation from Images
Automatically plots latitude, longitude from images on Google maps.
...After loading images, with a single click, iMap plots all the images on World Map to visually check where they have been captured, generate timeline and activity of suspect and match them with CDR (Call Detail Record) Details. To generate a report, you can export this data into PDF or Excel file according to your requirements. -
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Sistem Informasi Desa Kawasan
Aplikasi Sistem Informasi Desa Dan Kawasan
...Untuk Menjalankan cukup mudah , tinggal di install dan dijalankan . secara Default aplikasi akan diintall di c:\wxSID dan untuk memeriksa seluruh hasil baik pembuatan surat layanan masyarakat Otomatis dan lainnya seluruh filenya berada di C:\WxSID\Data . Untuk masuk kesetiap layanan : Nama : admin Password : admin Bila membutuhkan Source Code secara keseluruhan dapat menghubungi twitter @pythonesiaorg . Aplikasi ini dikembangkan dengan menggunakan : a. Python2.7 b. WxPython2.8 c. Python-Docx d. Jinja2 e. Docxtpl f. Openpyxl g. Pymysql -
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MethyMer
Design of specific primer combinations for bisulfite sequencing
...SpG islands) and includes specificity test (based on bowtie alignment against bisulfite-treated genome). It also incorporates TCGA CpG methylation (microarrays) and gene expression (RNA-Seq) data, as well as methylation-expression correlation analysis results for 20 human cancer types. ENCODE genome regions annotation data are also integrated in MethyMer -
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httpbin
HTTP request and response service, written in Python + Flask
...With the HTTP methods you can test different HTTP verbs. You also have auth methods, status codes to generate responses with given status code, request inspection features to inspect the request data, response inspection to inspect the response data like caching and headers. The response formats feature returns responses in different data formats, the dynamic data feature generates random and dynamic data. You can also create, read and delete Cookies. The images feature returns different image formats, and you can return different redirect responses as well. ...