Search Results for "python data analysis" - Page 69
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Showing 3327 open source projects for "python data analysis"
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irit_diff_sequences
Python tool to create lifespan sequences from Wikipedia edits history
A Python tool which produced lifespan sequences from edits history. The tool is first developed for the Wikipedia edits history but can easily be adapted for others applications. From a database containing for each article its list of revisions, produce one csv file per article containing authored sequences and lifespans. Output format: i,j,lifespan,author with - i : begining of the chars sequence - j : end of the chars sequence - lifespan : number of edits the sequence has survives... -
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ospfdiscoverysnmp
OSPF network discovery script via SNMP.
... between his PC and the router into the OSPF process, so he has IP connectivity to all other OSPF nodes. After providing necessary info and the OSPF info is gathered, the user has three choices: display the OSPF routers info on the screen, export the data to a file for Excel importing and generate the OSPF topology showing neighborships, router IDs and neighbor IPs. Tools used for coding and testing: Python 2.7.3, PySNMP, GNS3, Linux. Tested on Cisco 2621, 2691, 3660. -
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*WARNING* gtburst moved to github (https://github.com/giacomov/gtburst). ########################################## gtBurst is a tool to download data, analyze and simulate Gamma-ray Bursts and Solar Flares as observed by the NASA Fermi satellite.
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PangView
Text Viewer that displays text similar to pango
A text viewer utility that displays text in a pango like markup. The utility is written in python, and uses the pygtk toolkit. The parser reads pango tags similar to html. The utility was written, so formatted text can be displayed quickly. NEW! The parser now is updated to use a faster method of internal data structure. -
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It's a web application which provides a unify solution to stat. CVS/SVN repository modules code change information and generate html reports. User can browse line of change, file of change, code diff, check-in comment and so on, it can stat. more repository modules one time. After repository modules configured, stat. is simple like a search.
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Stat cvs/svn Code Change
stat. cvs,svn code changes and generate html report
It's a web application which provides a unify solution to stat. CVS/SVN repository modules code change information and generate html reports. User can browse line of change, file of change, code diff, check-in comment and so on, it can stat. more repository modules one time. After repository modules configured, stat. is simple like a search. It's the mirror project of CodeChangeViewer: http://sourceforge.net/projects/ccv/. -
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Yang XML viewer
PyGtk2-based application that shows Yang-models as Treeview
The application uses 'pyang' for creating a XML file and displaying the Yang-model in a Treeview. Additionally it allows to send Netconf requests to a configured target. For this purpose, it uses the Netconf client from [1] or can use an external console too. [1] https://github.com/tail-f-systems/JNC/blob/master/examples/2-junos/netconf-console -
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wmtsa-python
Discrete wavelet methods for time series analysis using python
Several python libraries implement discrete wavelet transforms. However, none of them, or at least none that I know, is aimed at scientific use. This library aims at filling this gap, in particular considering discrete wavelet transform as described by Percival and Walden. This module started as translation of the wmtsa Matlab toolbox (http://www.atmos.washington.edu/~wmtsa/), so most naming conventions and most of the code structure follows their choices. The code uses a mix of python... -
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MicroView is a 2D/3D image viewer and analysis tool. It is written in Python and uses VTK for all of its graphical capabilities.
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xmipp
Image processing suite for Electron Microscopy
XMIPP is an image processing suite for 3D-reconstruction of biological specimens from transmission electron microscopy data. NOTE that stable releases (including binaries) are longer stored at Sourceforge, but are available at http://xmipp.cnb.csic.es -
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myCStock
An other free stock market software in C++/Python
A parser for real-time update of stock market prices and a graphical interface with technical indicators. It is a small personal project initiated for extending my knowledge in C++ and Python, designing a GUI and, in a next stage, applying mathematical and statistical models to stock market prices analysis and prediction. If you have the same interest than I in experimenting and disussing design software and statistical models in finance, you are welcome to join the project. If you... -
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PhyloTrack
PhyloTrack, D3.js and JBrowse for phylogeny and positioning of samples
PhyloTrack is a JavaScript--based software tool that integrates the D3.js library for data visualization with the JBrowse tool for genome browser representation. It requires a phylogenetic tree of the common Newick data format as input, as well as three meta data files for samples, clade-defining nodes and clade color definitions - all in tab delimited format. Functionality within PhyloTrack shows the informative markers at each node in the phylogenetic tree, therefore highlighting clade... -
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Python language bindings for the GtkExtra widget set. GtkExtra is a useful set of widgets for the GIMP Toolkit, aka GTK+. It provides a spreadsheet-like matrix widget and widgets for 2-D and 3-D graphing.
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iMir
Integrated pipeline for HT miRNA-Seq data analysis
Processing of smallRNA-Seq data to gather biologically relevant information requires application of multiple statistical and bioinformatics tools from different sources, each focusing on a specific step of the analysis pipeline. The analytical workflow can be challenging for the continuous interventions by the operator, a critical factor when large numbers of datasets need to be analyzed at once. To allow a flexible and comprehensive analysis of smallRNA-Seq data we designed a novel modular... -
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IMAGINE
Biological image viewer and processor
Detection, enumeration, and sizing of biological organisms by image analysis. -
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math lib for .NET. n-dim arrays, complex numbers, linear algebra, FFT, sorting, cells- and logical arrays as well as 3D plotting classes help developing algorithms on every platform supporting .NET. Sources from SVN, binaries: http://ilnumerics.net
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Markup.py is an intuitive, light-weight and customizable HTML/XML generator in Python. Development moved to github in 2017 and the name changed to MarkupPy in order to be more pip friendly. See http://github.com/tylerbakke/MarkupPy for all further details (documentation, new releases, etc.). This sourceforge page is left as a historic relic and won't be updated.
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openSEQ
NGS compute distro proloaded with pipeline analysis software
.... The first homepage tab links to our pipeline constructer. The second homepage tab links to a xterm session on the client. Software included (location - name): path - biobambam path - bwa path - bowtie2 path - bowtie path - cufflinks path - bcftools path - tophat path - scalpel path - samtools path - sra-toolkit path - bamtools path - delly path - delly-parallel path - picard-tools path - fastahack path - twoBitToFa ~/prog/java/ - mutect ~/prog/python/ - platypus ~/prog/java/ - gatk -
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psignifit is a toolbox to fit psychometric functions and test hypotheses on psychometric data. This is version 3 which will now predominantly support python.
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CCH
A genetics tool that identifies genomic regions of shared ancestry
Combinatorial Conflicting Homozygosity (CCH) uses dense Single Nucleotide Polymorphism (SNP) genotypes to identify regions of the genome inherited from a common ancestor among any or all subsets of a group. Analysis is rapid and can identify loci containing genes for dominant traits. CCH is robust to the presence of phenocopies and can detect undisclosed shared common ancestry. The associated publication regarding CCH may be accessed here: http://www.biomedcentral.com/1471-2164/16/163... -
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Data Migrator for Oracle
Migrate/Copy your data between Oracle database and 13 major DBs.
Command line data Copy/Migration tool for Oracle. Supports Oracle 7.3, Oracle 8i, Oracle 9i, Oracle 10G, Oracle 11G and 13 major databases. 1. Exadata 2. Sybase ASE 3. Informix Innovator C 4. Sybase SQL Anywhere 5. DB2 UDB 6. CSV 7. SQLServer 8. MariaDB 9. Sybase IQ 10. PostgreSQL 11. MySQL 12. Informix IDS 13. TimesTen -
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The pyARS python module allows developers to use BMC's ARSystem (Remedy ARS) and Atrium CMDB functions from within Python. Using Python's interactive shell, it is extremely easy to retrieve and modify data entries as well as workflow objects. ARSystem, also known as ARS or Remedy, is a powerful enterprise workflow engine. Atrium is a Configuration Management Data Base, a.k.a. Installed Base built on top of ARSystem.
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log4j parser
Turn log4j or similar logfiles into a Python list object
Called from command line, this python program counts the lines in your logfile with ERROR, INFO, WARN etc. You can also import the function generate_log_report from it and use the returned list object in your Python program for further processing. -
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BigBrotherBot (B3) is a cross-platform, cross-game game administration bot. Features in-game administration of game servers, multiple user access levels, and database storage. Currently include parsers for: Call of Duty, Urban Terror and more!
