Search Results for "the command line" - Page 52
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Showing 2534 open source projects for "the command line"
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Pysimony
A Pythonic Implementation of Parsimony Inference of Phylogeny
UPDATE: After some bug fixes, I've ditched Pysimony for Javamony: https://sourceforge.net/projects/javamony/ Given Python's beauty, I know that someday I will have to finish Pysimony. A student's first attempt at a phylogenetic inference program, written in the simplistic yet elegant Python. Pysimony reads a FASTA file (only ATGC accepted) specified as its only argument. Basic testing has shown that it is slow, inaccurate and most definitely inefficient. An... -
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ELIMINADOR_RECYCLER
PARA ELIMINAR LA CARPETA RECYCLER
SCRIPT PARA ELIMINAR LA CARPETA RECYCLER PRIMERA VERSION INSTALABLE PARA WINDOWS A MODO GRAFICO -
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sub2srt-python
sub2srt
sub2srt convert subtitles in *.sub (MicroDVD) to *.srt (subrip) format. Using python. there is also portable version. there is another project with similar name which does not work for me. Command line, multiplatform, portable. -
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Local User Management Made Simple (lumms) is a local user manager for Linux, AIX and Solaris. It allows you to change local user accounts, groups including passwords from one place. This will update on all hosts the local passwd and shadow files.
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Enterprise is an open source monitor and advanced log parser. Based on Enterprise ship state system controller of Star Trek, It is able to let you know about the state of your services in a given time.
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Evolving Objects
This project have been merged within Paradiseo.
See the new project page: https://nojhan.github.io/paradiseo/ (Archived project page: http://eodev.sourceforge.net/) -
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cheats
Gnu / Linux command reference for the CLI
Stuck in init level 1 without any clue or proper cheatsheet printout? I've been there a good many times, so I decided to create a command reference, available where I need it, in the command line interface. -
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clippings2tiddly
Create a Tiddlywiki from Amazon Kindle's "My Clippings"
This little script reads the file "My Clippings.txt" as created by Amazon's Kindle and converts it to a Tiddlywiki html-File. The locations of each document are sorted in the process. Currently things are VERY basic - but hopefully it will evolve over time. Needed: an emtpy Tiddlywiki (empty.html) and a clippings-file from kindle. -
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Mathemapy
A Python calculator program
Mathemapy is a feature-rich calculator made in Python. It can do multiple types of division, solve equations, expand equations and more. -
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brocc
BLAST Read and OTU Consensus Classifier
NOW HOSTED ON GITHUB: https://github.com/kylebittinger/brocc Old releases are kept here for archival purposes. -
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JBoost is a simple, robust system for classification. JBoost contains implementations of several boosting algorithms in an alternating decision tree framework. In addition, JBoost provides extensible software for adding more learning algorithms.
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GemSIM is a software package for generating realistic simulated next-generation sequencing reads with quality score values. Both Illumina and Roche/454 reads (single or paired end) can be simulated using appropriate empirical error models.
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USB Drive Renamer for Mac OSX
Quickly rename large quantities of USB drives, just plug in and unplug
A script designed to rename large quantities of USB drives or other portable hard drives. When the script is running, all the user needs to do is this: * Plug in the portable device * Wait for about a second * Unplug the portable device * Repeat The script is immediately ready to accept the next drive for renaming. No need to manually eject the drive. The script requires that all devices initially have the same name, though it can be fairly easily extended. Even though there... -
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sqlmap is an open source penetration testing tool that automates the process of detecting and exploiting SQL injection flaws and taking over of database servers.
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im2ascii
Image to ASCII converter that takes character shape into account
im2ascii is a small python script that converts images to ascii-art. Unlike common ascii-art generators, it does not only use each character's mean brightness, but matches the full character shape. Pro: Better ascii-art quality (see screenshots for examples) Con: Matching is very resource intensive Dependencies: Python 2.7, PIL, numpy, scipy -
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jallie
Java classfile assembler/disassembler and interactive low-level editor
Java Classfile assembler/disassembler and low-level interactive editor. Allows viewing and manipulation of Java class data both manually and via scripts. Load in a class file, make changes, and then save the result. -
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Fetches topics with new posts from ZetaBoards forums and does something with the URLs, like opening them in a browser. Configurations can be stored and manipulated for quicker fetching. Development, translations, bug reports, etc. are handled at Launchpad: https://launchpad.net/zb-fetcher SourceForge is used to host released files.
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SpiderOak Nagios check
SpiderOak Nagios check
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CSV2XLS is a command line utility that enables the creation of xls files across platforms. It supports multiple sheets, formatting, and the choice of fonts. It requires python. There is also an R/S+ plugin available, which is called DATAFRAMES2XLS.
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QUASR
Cross-platform NGS processing and analysis pipeline in Python
QUASR is a lightweight pipeline written to process and analyse next-generation sequencing (NGS) data from Illumina, 454, and Ion Torrent platforms. Although originally written for viral data, it is generic enough to work on any NGS dataset. Functions include: duplicate removal demultiplexing primer-removal quality-assurance (QA) graphing quality control (QC) consensus-generation minority-variant determination minority-variant graphing The main current version is 6.X, which is... -
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Compilation of Physics Calculators
A compliation of Physics derived claculators
A NEW GUI VERSION WILL BE RELEASED SOON! Thank you for visiting the Physics Calculator, provided by PIezoSystems Inc., please visit their company website at https://piezosystems.org. For other downloads, please visit our github page, https://github.com/PiezoSystems. We hope that you find this program useful and easy to use, for troubleshooting, please email us, contact@piezosystems.org. If any bugs were found, please email us at bugs@piezosystems.org. -
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Easy control of virtual machines of VirtualBox (virtualization solution) on a Linux headless server. Autostart and autosave on boot/halt. Start, stop, save, backup and show status of sessions in batch mode from command line.
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Conky Skin Chooser
A now working console (GUI SOON!) skin manager for Conky.
Conky Skin Chooser is a console application to manage conky skins. View the Home page to get started, find installation help, and to see revision history (Fun Stuff!). Did I forget to say it works now? It really does. -
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addapp
Add manually-installed applications to GNOME Shell
A (yet) commandline tool that interactively generates a *.desktop file and adds it to GNOME Shell. -
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evofetch
Mining tool for software repositories
EvoFETCH is a tool to extract information about software entities such as classes, methods, and attributes from software repositories. EvoFETCH is middleware and makes use of other freely available software to perform the extraction and provide query functionality.