Search Results for "tree" - Page 5
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Showing 185 open source projects for "tree"
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MongoDB Atlas runs apps anywhereMongoDB Atlas gives you the freedom to build and run modern applications anywhere—across AWS, Azure, and Google Cloud. With global availability in over 115 regions, Atlas lets you deploy close to your users, meet compliance needs, and scale with confidence across any geography.
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AI-generated apps that pass security reviewRetool lets you generate dashboards, admin panels, and workflows directly on your data. Type something like “Build me a revenue dashboard on my Stripe data” and get a working app with security, permissions, and compliance built in from day one. Whether on our cloud or self-hosted, create the internal software your team needs without compromising enterprise standards or control.
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GASiC
Genome Abundance Similarity Correction
...You can find the accompanying paper here: http://nar.oxfordjournals.org/content/41/1/e10.short Thanks to the great work of the SeqAn team, you can now use GASiC as a Knime workflow: https://github.com/seqan/knime_seqan_workflows/tree/master/metagenomics_gasic_workflow -
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PhyloTrack
PhyloTrack, D3.js and JBrowse for phylogeny and positioning of samples
PhyloTrack is a JavaScript--based software tool that integrates the D3.js library for data visualization with the JBrowse tool for genome browser representation. It requires a phylogenetic tree of the common Newick data format as input, as well as three meta data files for samples, clade-defining nodes and clade color definitions - all in tab delimited format. Functionality within PhyloTrack shows the informative markers at each node in the phylogenetic tree, therefore highlighting clade-defining polymorphism. This functionality has been implemented using the tabix tool on the server side, providing simple and rapid access to the information at each tree node, including informative SNPs stored in VCF-similar files. ... -
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IncludeGraph
Determine which files get included in source files.
IncludeGraph is a tool written in Python that performs code analysis on a C and C++ source tree. It can determine the inclusion path for a header file as well as provide charts about which headers are the most included ones or which files include the most headers. It also has a limited knowledge of conditional preprocessor constructs by implementing a subset of the functionality of the C preprocessor. -
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Music Merge Manager
Identify duplicate songs based on track metadata (ID3, etc)
...Artist, album, and track length? All of the above? Ultimately this program will let you delete duplicates from either the left or right trees, or copy non-duplicated files from one tree to the other. However until the matching code gets a lot more reliable the only action allowed is to export the list of files suspected to be duplicated in both trees. (Prerequisite: uses the `Mutagen' library to process ID3 data and `wx' for the UI.) The latest code is always available via `git' but since there's undoubtedly a lot of bugs right now pre-packaged .ZIP files will only be made available for `big' changes. -
Enterprise-grade ITSM, for every businessFreshservice is an intuitive, AI-powered platform that helps IT, operations, and business teams deliver exceptional service without the usual complexity. Automate repetitive tasks, resolve issues faster, and provide seamless support across the organization. From managing incidents and assets to driving smarter decisions, Freshservice makes it easy to stay efficient and scale with confidence.
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simplex with branch and bound
A tool for teaching simplex and branch & bound methods
This is a tool for teaching simplex and branch & bound methods. For simplex method, it comes with several examples including degeneracy and cycling, and allow the user to dictate how to pivot. For branch and bound method, it is desinged to interact with the user to explore all possible branch and bound trees. The user can also load a problem from a text file or simply type in a model directly. The format is very simple and very similar to the LP format, see the packed-in examples. -
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pyMantis is a data-management system for (systems) biology build on the web2py framework. It features: tree based file explorer, relational db table wizzard with automated creation of user interfaces, internal and external access management, wiki, ..
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t2t-pipe
automatic alignment pipeline for parallel treebanks
The *Tree-to-Tree (t2t) Alignment Pipe* is a collection of python scripts, co-ordinating the process of automatic alignment of parallel treebanks from plain text files with a single call from a unix command line. Supported Languages: DE, FR, EN -
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Patchamama is a binary patch maker/applier that works on directory tree. It can be used in application deployment, large scale project patching (including source and binary data). It use bsdiff for the binary diff job and 7zip for compression.
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TextBlob
TextBlob is a Python library for processing textual data
Simple, Pythonic, text processing, Sentiment analysis, part-of-speech tagging, noun phrase extraction, translation, and more. It provides a simple API for diving into common natural language processing (NLP) tasks such as part-of-speech tagging, noun phrase extraction, sentiment analysis, classification, translation, and more. TextBlob stands on the giant shoulders of NLTK and pattern, and plays nicely with both. Supports word inflection (pluralization and singularization) and lemmatization,... -
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A functional-structural model of tree growth based on carbon partitioning among individual organs that compete for resources.
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Medieval Middle Eastern mod based on Rhye's and Fall of Civilizations for Civilization 4: Beyond the Sword.
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hrefinder
Detection of homologous recombination events from SNP data
...But if a series of SNP alleles differ from the ancestral pattern, then it may be more likely that an HRE has occurred, particularly if the allele pattern matches that from another part of the tree better than that of the ancestral node. -
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CSST
Cascade and Sharing Survival Trees, an ensemble for survival analysis
Cascading and Sharing Survival Trees (CSST) is a tree-based enseble that allows to efficiently analize survival data. It is a strightforward extension of the CS4 method for lifetime collections of data. The CSST software comes along with its companion the CSST Prediction tool, to use the ensemble prediction in everyday life. Please, refer to the user's manual for further information. -
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gEcrit is a Python orientated source code editor. It tries to keep the interface as clean as possible and keep the menus simple. It features all the common features a Python programmer might need, including an interactive Python shell.
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Pysimony
A Pythonic Implementation of Parsimony Inference of Phylogeny
...Pysimony reads a FASTA file (only ATGC accepted) specified as its only argument. Basic testing has shown that it is slow, inaccurate and most definitely inefficient. An unlikely-to-be-the-most-parsimonious tree is printed upon completion in basic Newick tree format. As all parts of the program are the original work of a beginner programmer, this may represent one of the worst approaches to solving the phylogenetic problem. I have clearly avoided object-oriented programming. Nevertheless, I distribute this imagining it might someday be slightly educational or at least provide a laugh at the pathetic attempt it makes to reinvent the wheel -
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JBoost is a simple, robust system for classification. JBoost contains implementations of several boosting algorithms in an alternating decision tree framework. In addition, JBoost provides extensible software for adding more learning algorithms.
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HTML DOM Parser
HTML parser which can be used for screen-scraping applications
htmldom parses the HTML file and provides methods for iterating and searching the parse tree in a similar way as Jquery. To report bugs please mail me at bhimsen.pes@gmail.com -
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PyVocabularyTree
A vocabulary tree for image classification using OpenCV
A vocabulary tree for image classification have been designed to be integrated in mobile robotic applications. It is a learning schema based on decission trees, bags of features and inverted files. The design provides training and optimization parameters that have been characterized using several detectors and descriptors for several input datasets. -
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Create Launcher
Creates a .desktop launcher for the Linux menu system
This project is to develop a GUI/graphical way to create a .desktop file. Whereas alacarte can be used to do this, alacarte requires multiple creation of several launchers if one wants them in several menu areas. The menu specification allows one .desktop file to lists more than one menu location. This project doesn't support all possible .desktop formating choices, but allows the basics for someone who has a wine file, or some other program they would like to launch graphically to easily... -
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TreeLine is an information storage program that uses a tree structure to keep things organized. Each node of the tree can contain several user-defined fields, forming a mini-database.
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Main point is parsing documents with regular expression to the tree and edit them or replace some of the data, powered by your own python code. Python is very easy to understand, don`t be worried about this and try it! ;-)
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Naufrago! is a simple offline RSS reader (including images) written in Python.
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BlockIt provides a Python framework to scan and parse a program file into constituent nested blocks, however defined, forming a block tree of your code and can be used as a mechanism to "extend" in some sense, the underlying programming language.
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Prefix Tree
A lighting-fast prefix tree and DAWG implementation in C and python
A lighting-fast prefix tree (trie) and compressed prefix tree (DAWG) implementation. This library can be usefull for longest-prefix matching, code completion, dictionary compression, spell checking.
