Search Results for "structural analysis software" - Page 5
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Showing 395 open source projects for "structural analysis software"
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GromacsProSuite
Graphical User Interface for Gromacs
This tool is an integrated graphical interface that simplifies molecular dynamics simulations using Gromacs. It provides a structured, tab-based environment to set up, execute, and analyze simulations data without complex command-line operations. The software automates tasks such as topology generation, solvation, ion addition, minimization, equilibration, and production runs while executing GROMACS commands in the background. Built-in monitoring tracks CPU, RAM, and disk usage to ensure stable performance during parallel processing. Beyond simulation execution, it includes advanced trajectory processing and analysis tools such as RMSD, RMSF, SASA, clustering, PCA, hydrogen-bond analysis, Ramachandran plots, and FEL mapping. ... -
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pyLogos
Qualitative content analysis software.
pyLogos is a program to support text content analysis. Documents (imported from txt and docx files) are stored in a database, and may have marked text segments associated with codes. It is possible to retrieve these segments in various ways, generate word clouds, tabulate frequency of codes and words, among other outputs. pyLogos é um programa de apoio à análise de conteúdo de textos. Documentos (importados de arquivos txt e docx) são armazenados numa base de dados, podendo ter segmentos... -
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todo_notifier
Todo Notifier simplifies the management of todo items in your project
Simplify Todo management with Todo Notifier - a versatile Python library that generates automated summaries and sends reminders via email, SNS, SES & more. Integrate easily with other project management tools. The package is available on PyPi: https://pypi.org/project/todonotifier/ For more information, please check out the GitHub repository: https://github.com/ashu-tosh-kumar/todo_notifier Detailed code documentation on GitHub Pages:... -
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Croizat
A software package for quantitative analysis in Panbiogeography
Croizat is a free, user-friendly, cross-platform desktop software package which biologists can use to integrate and analyze spatial data on species or other taxa and to explore geographical patterns in diversity under a panbiogeographic and graph-theoretic approach. -
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GIXY
Nginx configuration static analyzer
Gixy is a tool to analyze Nginx configuration. The main goal of Gixy is to prevent security misconfiguration and automate flaw detection. Currently supported Python versions are 2.7, 3.5, 3.6 and 3.7. Gixy is well tested only on GNU/Linux, other OSs may have some issues. You can find things that Gixy is learning to detect at Issues labeled with "new plugin". By default Gixy will try to analyze Nginx configuration placed in /etc/nginx/nginx.conf. Or something else, you can find all other gixy... -
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Graphtage
A semantic diff utility and library for tree-like files such as JSON
Graphtage is a command-line utility and underlying library for semantically comparing and merging tree-like structures, such as JSON, XML, HTML, YAML, plist, and CSS files. Its name is a portmanteau of “graph” and “graftage”, the latter being the horticultural practice of joining two trees together such that they grow as one. Graphtage performs an analysis on an intermediate representation of the trees that is divorced from the filetypes of the input files. This means, for example, that you... -
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Code_TYMPAN
Open source software calculating industrial noise in the environment
Code_TYMPAN™ is an open source software for calculating industrial noise in the environment. It allows dealing with 3D realistic geometries and has a convenient Human Machine Interface to help engineers to build 3D models and to achieve analysis needed in environmental noise studies. Code_TYMPAN™ allows developing your own calculation method from basic components and geometrical solvers. -
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vocal-separate
An extremely simple tool for separating vocals and background music
...After processing, the tool outputs separate WAV files for each extracted stem, making it easy to export and use in audio editing or remix software. -
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MzDOCK - Multiple Ligand Docking Tool
MzDOCK is A Virtual Screening Tool For Drug Discovery Research
- Molecular Docking Virtual Screening Tool To Aid In Drug Discovery Research. - Published in Wiley, Journal of Computational Chemistry . Link: https://onlinelibrary.wiley.com/doi/abs/10.1002/jcc.27390 - Developed with Synchronized functioning of Python and Batch scripts -Integerated With Pymol-open-source for visualizing interaction (PSE file) generated from MzDOCK - Integrated with Molecule Drawing Tool - JSME Editor - If you are facing any issues or for queries . Contact us -... -
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sadsa
SADSA (Software Application for Data Science and Analytics)
SADSA (Software Application for Data Science and Analytics) is a Python-based desktop application designed to simplify statistical analysis, machine learning, and data visualization for students, researchers, and data professionals. Built using Python for the GUI, SADSA provides a menu-driven interface for handling datasets, applying transformations, running advanced statistical tests, machine learning algorithms, and generating insightful plots — all without writing code. -
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TekDT BMC Pro
Lightweight Windows deployment platform for USB/PXE boot, zero-touch
TekDT BMC Pro is a lightweight Windows deployment platform for bootable USB/HDD media and PXE network boot. It streamlines installation into a repeatable workflow: choose the boot target, select or download a Windows ISO, then deploy Windows and post-install software with unattended automation. The platform supports UEFI and Legacy boot, integrated DHCP for PXE, real-time client monitoring, remote control actions, smart driver delivery, TLS-encrypted server/client communication, offline... -
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CAIRO for AERMOD
AERMOD, visualisation, input, modelling and compiling tool
CAIRO for AERMOD v1.1 by MSc Dominik Subotić Simplified training software Avaliable: www.sourceforge.net/projects/cairo-for-aermod/ QGIS plugin: CAIROforAERMOD (Coming 2025.) Tutorial: https://www.youtube.com/watch?v=DZnsJuu1zLc AERMAP, AERMOD and AERPLOT analysis tool and input file compiler. Features: Automatic input by copying coordinates (Google Maps or text) and automatic conversion to UTM. -
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Yandex Music API
Non-official Python library for works with API service Index
This library provides Python interface for anyone undocumented and self-made API Yandex Music. It is compatible with Python 3.7 + and supports working with both synchronous and asyncio code. In addition to implementing a clean API, this library has a number of — high-level wrapping classes in order to make the development of customers and scripts simple and understandable. All documentation was written from scratch based on logical analysis during reverse development (reverse engineering) API. -
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GrainSizeTools script
A Python script for estimating the grain size from thin sections
...For users with coding skills, the script is organized in a modular way facilitating the reuse and code extension. Lopez-Sanchez, MA (2018). GrainSizeTools: a Python script for grain size analysis and paleopiezometry based on grain size. Journal of Open Source Software, 3(30), 863, https://doi.org/10.21105/joss.00863 -
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Neural Tangents
Fast and Easy Infinite Neural Networks in Python
Neural Tangents is a high-level neural network API for specifying complex, hierarchical models at both finite and infinite width, built in Python on top of JAX and XLA. It lets researchers define architectures from familiar building blocks—convolutions, pooling, residual connections, and nonlinearities—and obtain not only the finite network but also the corresponding Gaussian Process (GP) kernel of its infinite-width limit. With a single specification, you can compute NNGP and NTK kernels,... -
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PEP 8 Speaks
A GitHub app to automatically review Python code style
A GitHub app to automatically review Python code style over Pull Requests. PEP 8 Speaks is a GitHub integration which detects Python code style issues on new Pull Requests. You can install it on your Python projects and configure with your own code style. Check out the project on GitHub. Maintainers of Python projects have a difficult time reviewing Pull Requests by new contributors who may not be aware of the code style. This project makes reviewing Pull Requests a little bit easier. Style... -
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DirectXDiagnostic Tool Opener
Open DirectXDiagnostic Tool without any commands
Comprehensive Hardware Analysis, Monitoring and Reporting for Windows. Exhausting information about hardware components displayed in hierarchy unfolding into deep details. Useful for obtaining a detailed hardware inventory report or checking of various hardware-related parameters. Real-time monitoring of a variety of system and hardware parameters covering CPUs, GPUs, mainboards, drives, peripherals, etc. Useful for detection of overheating, overload, performance loss or failure... -
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nodejsscan
nodejsscan is a static security code scanner for Node.js applications
Static security code scanner (SAST) for Node.js applications powered by libsast and semgrep. nodejsscan is a static security code scanner for Node.js applications. -
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Wemake Django Template
Bleeding edge django template focused on code quality and security
What this project is all about? The main idea of this project is to provide a fully configured template for django projects, where code quality, testing, documentation, security, and scalability are number one priorities. This template is a result of implementing our processes, it should not be considered as an independent part. When developing this template we had several goals in mind. Development environment should be bootstrapped easily, so we use docker-compose for that. Development... -
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xTuring
Easily build, customize and control your own LLMs
xTuring is an open-source AI personalization software. xTuring makes it easy to build and control LLMs by providing a simple interface to personalize LLMs to your own data and application. xTuring provides fast, efficient and simple fine-tuning of LLMs, such as LLaMA, GPT-J, Galactica, and more. By providing an easy-to-use interface for fine-tuning LLMs to your own data and application, xTuring makes it simple to build, customize and control LLMs. The entire process can be done inside your... -
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Python Laboratory Operations Toolkit
many useful snippets for using python in a laboratory
A toolkit of Python software useful in a laboratory data acquisition and analysis environment. Includes support for such protocols as VXI-11 (and its extension, LXI), Vernier LabPro (now very old), and National Instruments DSTP (now very old). Also includes data analysis and modelling tidbits. Python3 updates are on the way in the very near future for the biggest packages. the vxi11 package is fully up-to-date, although see the blog post about python 3.13 -
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ACORBA
Automated approach to measure root tip angles of Arabidopsis thaliana
Gravitropic response is studied in most of the laboratories working with Arabidopsis thaliana, for example, to detect new phenotypes in mutants. However, manual analysis of images and microscopy data are known to be subjected to human bias. This is particularly the case for manual measurements of root bending as the angle is set subjectively. In this context, it is essential to develop and use automated or semi-automated image analysis to produce faster, reproducible, and unbiased data. In this context, we developped ACORBA (Automatic Calculation Of Root Bending Angles), a fully automated software to measure root bending angle over time. -
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whiteboxgui
An interactive GUI for WhiteboxTools in a Jupyter-based environment
The whiteboxgui Python package is a Jupyter frontend for WhiteboxTools, an advanced geospatial data analysis platform developed by Prof. John Lindsay (webpage; jblindsay) at the University of Guelph's Geomorphometry and Hydrogeomatics Research Group. WhiteboxTools can be used to perform common geographical information systems (GIS) analysis operations, such as cost-distance analysis, distance buffering, and raster reclassification. Remote sensing and image processing tasks include image... -
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AI-Agent-Host
The AI Agent Host is a module-based development environment.
The AI Agent Host integrates several advanced technologies and offers a unique combination of features for the development of language model-driven applications. The AI Agent Host is a module-based environment designed to facilitate rapid experimentation and testing. It includes a docker-compose configuration with QuestDB, Grafana, Code-Server and Nginx. The AI Agent Host provides a seamless interface for managing and querying data, visualizing results, and coding in real-time. The AI... -
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MLPACK is a C++ machine learning library with emphasis on scalability, speed, and ease-of-use. Its aim is to make machine learning possible for novice users by means of a simple, consistent API, while simultaneously exploiting C++ language features to provide maximum performance and flexibility for expert users. * More info + downloads: https://mlpack.org * Git repo: https://github.com/mlpack/mlpack
