Search Results for "research database" - Page 5
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Showing 241 open source projects for "research database"
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pySTEP or Python Strongly Typed gEnetic Programming: A light Genetic Programming API that allows the user to easily evolve populations of trees with precise grammatical and structural constraints.
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GEPETTO - Gene Prioritization in Java
GEPETTO (GEne Prioritization ExTended TOol)
GEPETTO (GEne PrioriTization ExTended TOol) is an original open-source framework, distributed under the LGPL license, for gene selection and prioritization on a desktop computer that ensures confidentiality of personal data. It takes advantage of the data integration capabilities in the SM2PH-Central Framework(KD4v,MSV3d,BIRD,..), combined with in-house developed gene prioritization methods. It currently incorporates six prioritization modules, based on gene sequence, protein-protein... -
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That project aims at studying and comparing typical airline IT methods, for instance RM-related algorithms. It works from a Unix/Linux/Mac command-line, and exposes basic APIs. It is being developed in C++, with Python wrappers for some components.
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Laboratory notebook using version control system and independent date-time stamping (as notarization), in order to ensure record accountability, auditing, and conforming to US FDA 21 CFR 21's rule on electronic records. Please kindly rate this application or drop me an email at [ mauriceling AT acm DOT org ] so that I can hear from you. Otherwise, I have no idea who the users are. Please kindly help.
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GUI for DEDA
GUI for DEmography Data Analysis
<This project has been completely rewrote and transformed into a new one: https://sourceforge.net/projects/deday/. 2013/06/26> The graphic user interface for DEDA (DEmography Data Analysis), a scientific software package fitting survivalship data to a number of distributions using maximum likelihood (ML) method. Currently, Weibull (2p), Gompertz and Gompertz-Makeham are supported. IMPORTANT NOTICE: Only the GUI is provided here. In order to perform the analysis, one also need the DEDA... -
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PLASMAKIN: a chemical kinetics package
A library to compute the electron and chemical kinetics on plasmas
PLASMAKIN is a package to handle physical and chemical data used in plasma physics modeling and to compute gas-phase and gas-surface kinetics data: particle production and loss rates, photon emission spectra and energy exchange rates. -
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openBmap
a free and open map of wireless communicating objects
openBmap collects data and provides open maps and statistics of all communicating objects: cellular antennas, wifi hotspots. All softwares from back-end to client are open-source under AGPL v3 license. -
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Motinha
Information Gathering and Network Exploitation Framework
Motinha is a Simple Information Gathering and Network Exploitation Framework coded in Python. Here we have a bridge between the final user and the most futurists’ tools on the Internet to find juice info around any network, website, domain, company or persons and in some cases exploit some features to have fun , now let’s Shut Up And Hack! -
Build Agents and Models on One PlatformGemini Enterprise Agent Platform is Google Cloud's comprehensive platform for developers to build, scale, govern, and optimize agents and models. Choose from Google's most advanced models and third-party models like Anthropic's Claude Model Family.
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Open Source Geographical Wifi Analyser Tool
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ProSym
Software package that facilitates traffic simulation
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u/sbmv2012
Taxonomy assignment of metazoans using a python based pipeline
The aim of this project is to create an automated pipeline for taxonomic assignment of DNA sequences obtained from environmental samples. We develop a series of python scripts to process the raw sequence data obtained from benthic environmental samples and to taxonomical assignment of these sequences and finally to integrate all data in a relational database. -
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Primer Design Tool
Design PCR primers
A simple tool to design DNA primers for mutagenesis in BGME lab (JHU). Allows users to select or enter background sequence and add current and new mutations. During the design process, users are presented with various updating checks to guide them. -
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Quick Quote
Keep all of your quotes in one place and easily find them later.
Quick Quote allows you to store quotes and easily find them by searching for things like names, dates, events or anything else you tag when entering your quote. Great for history students, or people who often use quotes from people, such as historical, political figures, or actors, inventors, anyone who has said something worth remembering, and would like easy access to them. -
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Auto File Selection
Detect all the "important" files from your computer.
The main aim of this project is to design and develop a mechanism that can find all the “important” files inside a computer. -
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pygolem
Python API for the GOLEM Tokamak discharge database
This simple Python API aims to provide a simple and easy to understand access to the discharge database of the GOLEM Tokamak. The scipy, numpy and matplotlib Python libraries are used for data analysis and plotting. -
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Bamboo Engine
Game framework on top of Python, Panda3D and Twisted
Bamboo intends to be a complete end-to-end game framework for client/server applications using Twisted for data exchange, Panda3D for rendering and coded in Python. Support for PyPy/CPython may be considered at a later point. An Extreme/Agile Development model is in use to allow for emergent design (IE: changing requirements). Release is updated whenever a feature is added and all tests pass cleanly 100% -
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ProtDB
A protein database management framework
This repository is outdated, the project has been renamed to SysBioTK and can be found at: https://sysbiotk.sourceforge.io/ ProtDB is a framework which aims to aid in the management of information on proteins from several databases, storing the information in a library. Several search functions are also included in order to filter the proteins in the library. Support for different screenings, such as control groups, is also included. -
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Plantlore is a botanical occurence database being written in Java. It also has a BIOCASE Provider software based web interface.
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AnnTools is an efficient, fast and robust bioinformatics tool annotating SNP and CNV calls generated from sequencing and microarray data.
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Forecast Production Assistant
Met object database and interactive graphical editor
Meteorologists use the FPA to create a series of weather charts, known as depictions, that show weather fields over a sequence of times. The weather fields can contain grid point data or sets of areas, lines or scattered points. The weather depictions are not just graphical displays, but windows into an object database. By connecting processes to the database, forecast offices can automatically generate forecast products or run local models, while spending more of their time on weather... -
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Bibus is a bibliographic database. It uses a MySQL or SQLite database to store references. It can directly insert references in OpenOffice.org and MS Word and generate the bibliographic index.
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A GUI program to create the plasmid database forms for BGME lab. This program presents user with a data entry form for entering plasmid information and automatically converts DNA sequence to protein, aligns it, and creates text output file.
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This is intended as an open-source, multi-platform link diagramming tool for intelligence analysis. The goal is to be able to store objects using any database abstraction or in XML. This project needs much wheel reinvention, so assistance is welcome.
