Search Results for "file analysis" - Page 5
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Showing 232 open source projects for "file analysis"
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ECOLOG
A database management system for ecological field surveys
ECOLOG is a specimen-based, cross-platform relational database management system, aimed at the storage, retrieval and preliminary analysis of data on sites, species, and specimens gathered in ecological field surveys and biodiversity inventories. The main goal of ECOLOG is to make the data gathered in ecological field surveys readily accessible, providing lists of species collected in the study area and informations on habitat preferences, abundance or rarity of a given species, biometrics,... -
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MutaNET
NGS Pipeline and Automated Mutation Analysis
MutaNET comes with a next generation sequencing (NGS) pipeline that calls mutations based on paired-end NGS reads, an automated mutation analysis tool and various file converters and mergers. The mutation analysis feature considers the coding region, protein domains, regulation and transcription factor binding site information, and can be used to analyse the potential impact of mutations on antibiotic resistance. -
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pydatascope
Software oscilloscope using Python and tkinter
Software oscilloscope using Python and tkinter. Supports multiple sources: socket, file, audio, USB. Displays data by samples, time or frequency. Scales the input automatically or manually. -
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Keylogger
A simple keylogger for Windows, Linux and Mac
Keylogger is a simple keystroke logger for Windows, Mac and Linux. A keystroke logger or keylogger is basically a program that records keystrokes and saves them in a log file on your local computer. This keylogger is simple and bare bones, but works wonderfully and is useful for a number of things. You can use it to track key movements and make sure no one is using your computer while you’re away, or use it for self-analysis. In businesses and offices it can be used to monitor employee activity; in schools it can track keystrokes and log banned words. -
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MToolBox
A bioinformatics pipeline to analyze mtDNA from NGS data
...MToolBox includes an updated computational strategy to assemble mitochondrial genomes from Whole Exome and/or Genome Sequencing (PMID: 22669646) and an improved fragment-classify tool (PMID:22139932) for haplogroup assignment, functional and prioritization analysis of mitochondrial variants. MToolBox provides pathogenicity scores, profiles of genome variability and disease-associations for mitochondrial variants. MToolBox provides also a Variant Call Format file (version 4.0) featuring, for the first time, allele-specific heteroplasmy. Please, check out the most recent updates of the source code with the Github repository of MToolBox: https://github.com/mitoNGS/MToolBox or visit the Web version of MToolBox @ MSeqDR: https://mseqdr.org/mtoolbox.php -
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The Development System for Auditory Modelling (DSAM) is a computational library designed specifically for producing simulations of the auditory system. It brings together many established auditory models within a flexible programming platform.
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AICtools
Workflow and set of tools for Automated Imagery Classification
AICtools is a GIS workflow and set of tools to facilitate Automated Imagery Classification (AIC) and analysis of surface features over time. Allows bulk processing of large data sets, including automated metadata processing/filtering, compressed archive extraction and file manipulation, raster band compositing, pre-processing, mosaicking, clipping. Automates a subset of operations involved in classification of satellite imagery and the associated raster calculations used for time trend analysis. -
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Python4Proteomics Course
Python course for Proteomics analysis
Python course (in Spanish) for Proteomics analysis using basically Jupyter NoteBooks. For more information, you can have a look at the readme.md file in the source code tree: https://sourceforge.net/p/lp-csic-uab/p4p/code/ci/default/tree/readme.md -
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BPF Performance Tools
Official repository for the BPF Performance Tools book
BPF Performance Tools Book is the companion repository for Brendan Gregg’s book on Linux performance analysis using eBPF and BCC tracing technologies. The project contains scripts, examples, and reference material that demonstrate how to inspect kernel behavior, application performance, CPU usage, networking activity, file systems, and system bottlenecks in real time. It serves as both an educational resource and a practical toolkit for Linux engineers, SREs, and performance analysts working with modern observability workflows. ... -
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Crystalsim - XRD hkl simulation
X-ray diffraction (XRD) analysis for hkl simulation of any crystal.
Crystalsim is a simple freeware program with a neat graphical user interface for X-ray diffraction (XRD) data analysis . It can simulates all possible {hkl} planes data for the selected crystal. Crystallographic Information File (.cif) can also be used. Analyze both powder diffraction and single crystal data . Indexed at International Union of Crystallography (IUCR). Crystalline lattice parameters such as ‘a’, ‘b’, ‘c’ as well as interfacial angles such as alpha, beta, gamma can also be entered manually. ... -
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FastoCloud PRO
IPTV/NVR/CCTV/Video cloud https://fastocloud.com
IPTV/Video cloud Features: Cross-platform (Linux, MacOSX, FreeBSD, Raspbian/Armbian) GPU/CPU Encode/Decode/Post Processing Stream statistics CCTV Adaptive hls streams Load balancing Temporary urls HLS push EPG scanning Subtitles to text conversions AD insertion Logo overlay Video effects Relays Timeshifts Catchups Playlists Restream/Transcode from online streaming services like Youtube, Twitch Mozaic Many Outputs Physical Inputs Streaming Protocols File Formats Presets Vods/Series server-side support Pay per view channels Channels on demand HTTP Live Streaming (HLS) server-side support Public API, client server communication via JSON RPC Protocol gzip compression Deep learning video analysis Supported deep learning frameworks: Tensorflow NCSDK Caffe ML Hardware: -
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MCNPydE
MCNP data extraction and display software library
MCNPydE is a Python library for extracting data from MCNP output file. It requires Python, Matplotlib and Numpy. It is a data reduction tool for MCNP output for ease of results analysis and viewing. -
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pysourceinfo
RTTI for Python Source and Binary Files
The 'pysourceinfo' package provides source information on Python runtime objects based on 'inspect', 'sys', 'os', and 'imp'. The covered objects include packages, modules, functions, methods, scripts, and classes by two views: - File System View - packages, modules, and linenumbers - based on files and paths - Runtime Object View - callables, classes, and containers - based on in-memory RTTI / introspection The supported platforms are: - Linux, BSD, Unix, OS-X, Cygwin, and... -
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BCAW Tool
Bio Codon Analysis Workflow Tool
BCAWT was developed using python 3.7 with build in and third-party modules. The usage of BCAWT is made to be very easy where users have only to input a fasta format file containing genes to be analyzed, and a bunch of analysis will be performed with 23 different output files -
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Xplico
Xplico is a Network Forensic Analysis Tool (NFAT)
Xplico is a Network Forensic Analysis Tool (NFAT). The goal of Xplico is extract from an internet traffic capture the applications data contained. For example, from a pcap file Xplico extracts each email (POP, IMAP, and SMTP protocols), all HTTP contents, each VoIP call (SIP, MGCP, MEGACO, RTP), IRC, WhatsApp... Xplico is able to classify more than 140 (application) protocols. -
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FOSS license
FOSS license and sentence token
...A license (both by-inclusion or by-reference) is a sequence of sentence-tokens. Sentence-tokens are generalized using one or more regular expressions. we propose an idea for license identification based on the analysis of each sentence in the license statement of a source code file. -
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Python Taint
Static Analysis Tool for Detecting Security Vulnerabilities in Python
Static analysis of Python web applications based on theoretical foundations (Control flow graphs, fixed point, dataflow analysis) Detect command injection, SSRF, SQL injection, XSS, directory traveral etc. A lot of customization is possible. For functions from builtins or libraries, e.g. url_for or os.path.join, use the -m option to specify whether or not they return tainted values given tainted inputs, by default this file is used. -
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Twitter Intelligence
Twitter Intelligence OSINT project performs tracking and analysis
A project written in Python for Twitter tracking and analysis without using Twitter API. This project is a Python 3.x application. The package dependencies are in the file requirements.txt. Run that command to install the dependencies. SQLite is used as the database. Tweet data is stored on the Tweet, User, Location, Hashtag, HashtagTweet tables. The database is created automatically. analysis.py performs analysis processing. -
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D-Tailor
D-Tailor: automated analysis and design of DNA sequences
Recent advances in DNA cloning and synthesis technologies afford high throughput implementation of designed sequences into living cells. However, our ability to design sequences to interrogate multifactorial biological processes and further engineer biological functions is lagging behind. DNA-Tailor (D-Tailor) is a fully extendable software framework for biological sequence analysis and multi-objective sequence design. D-Tailor permits the seamless integration of an arbitrary number of... -
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survol
RDF-based framework monitoring business systems activity
A Python agent and a web interface aiming to help the analysis and investigation of a legacy application. A set of machines, processes, databases, programs etc ... all communicating with each other, manipulating your data, and whose software architecture has become, with time, complicated, difficult to understand, and undocumented. Data are aggregated with an RDF inference engine, creating a global vision of the business information processing. -
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pivottablejs
Drag’n’drop Pivot Tables and Charts for Jupyter/IPython Notebook
PivotTable.js is a Javascript Pivot Table and Pivot Chart library with drag-drop interactivity, and it can now be used with Jupyter/IPython Notebook via the pivottablejs module. I first built PivotTable.js with a plan to build an in-browser data analysis tool, and got as far as one where you could load up a CSV file in the browser for display. Since then, however, the Jupyter project has gathered steam and now provides a browser-based interface to some of the most powerful data processing libraries in the world, so it makes sense to interface with it. -
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Indexmeister
automatic indexing for large LaTex documents
Indexmeister reads a variety of formats (.tex, .docx, .epub, and others) and suggests keywords for indexing. The included program Imbrowse provides a semi-automatic interface to rapidly add index tags to multi-file latex documents. -
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Construct2D
COmputational fluid dyNamics STRUctured grid CreaTor for 2D airfoils
Construct2D is a grid generator designed to create 2D grids for CFD computations on airfoils. The grids are generated in Plot3D format. The only required input file is the set of coordinates defining the airfoil geometry, using the same format as XFoil, the popular vortex-panel code for airfoil analysis. Construct2D can create grids with O topology (recommended for airfoils with a blunt trailing edge) or C topology (recommended for airfoils with a sharp trailing edge). Now available in version 2.0: hyperbolic grid generation to create higher quality grids in a fraction of the time compared to elliptic grid generation. ... -
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lr2rmats
Long read to rMATS
lr2rmats is a Snakemake-based light-weight pipeline which is designed to utilize both third-generation long-read and second-generation short-read RNA-seq data to generate an enhanced gene annotation file. The newly generated annotation file could be provided to rMATS for differential alternative splicing analysis. More information can be found at https://sourceforge.net/p/lr2rmats/wiki/Home/ -
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ELINT Alchemist
Plot, analyse and measure ELINT Time-Based data.
This program will open an ELINT Time-Based Data (TBD) file and plot it for purposes of measurement and analysis. Test files included. New ver 0.4 added 2018-01-01.
