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...https://github.com/ecell
The development of E-Cell now continues on GitHub.
The Subversion repository was abandoned.
"""
E-Cell System is an object-oriented software suite for modeling, simulation, and analysis of large scale complex systems such as biological cells. It allows many components driven by multiple algorithms with different timescales to coexist in a model.
"No comment!" is a command-line tool that generates various comment-related metrics for source code files (e. g. comment density, blank lines per file)
Methods and testing of methods for automatic analysis of in situ cyclic
voltammetry data.
This, at least initially, is the code from my masters thesis, which was
done as a contribution to a larger project called Aevum. Aevum is being
developed at t
FONZIE is a bioinformatic tool written in Python developed for the genetic cartography speciality. FONZIE allow as well to find markers on a set of sequences than to find associate oligonucleotides. http://www.biomedcentral.com/1756-0500/3/322/abstra
Patch file shows difference in files in whole lines. Sometimes those lines are very similar, only one or two words changed. This script compares changed lines by characters and highlights actual differences in them - very helpful with long lines.
This is a fast C implementation of Arturo Camacho's SWIPE' pitch extraction algorithm. See the project homepage for more about the advantages of the SWIPE' algorithm. swipe-1.0.tar.gz contains the current source, which should compile quite neatly.
DTMF detector library and/or application that reads in the specified audio file and returns/outputs whether DTMF detected and/or list of detected digits. May have GUI and command line interfaces.
A python package to find repetitive format pattern in HTML pages and extract information from them using this pattern. The idea is that in pages that have some kind of a list, there will be a repetitive pattern for the human eye (the page format).
Project's new home: https://github.com/Stunner/FileZilla-Log-Analyzer
Python scripts that filter, parse, mask, and analyze FileZilla Server Log files. Works on Windows, Linux, and Mac systems.
WARNING: NEW VERSIONS ARE BEING POSTED TO GITHUB HERE: https://github.com/Stunner/FileZilla-Log-Analyzer
This project is aimed at providing useful thermodynamic tools for biochemists, including formation energy estimation of virtually every biochemical compound and metabolic pathway analysis and profiling.
Data mines the voting record and other actions of Members of the UK Parliament. Extracts information from the parliament website and stores it in a database. Provides tools to analyse the information, producing statistics and tables about the MPs.
ngram is a module to compute the similarity between two strings. It is different to python's "difflib.SequenceMatcher" in that it cares more about the size of both strings. ngram is an port and extension of the perl module called "String::Trigram
Transana is a cross-platform tool for the transcription and qualitative analysis of audio and video data. It also provides the ability to identify and organize analytically interesting portions of videos, as well as attach keywords to those video clips.
Use python to parse privoxy log in clf format and refer to wot ratings of the site and then dump the data in a sqlite database for statistics generation later.
A spread sheet engine running over python. Any formula is pure python! You can do Macro in python and include any python package like NumPy. There is bult-in functions like D([list]) which automatically extend the list in cells.
Onyx is for rapid prototyping and large-scale experimentation on advanced machine-learning algorithms with an emphasis on algorithms for online or streaming analysis, modeling, and classification.
A command-line Python utility to mine information on open source projects using the ohloh web service APIs. The script is enables analysis of open source projects indexed by ohloh by providing source lines of code (SLOC), contributor data and other info.
A collection of tools for working with the comparative data analysis ontology including import/export facilities for common phylogenetic file formats, and also a triple-store framework.
FAUNUS is an object oriented class library for molecular simulation, written in C++. It contains routines and utility programs for, Metropolis Monte Carlo sampling (NVT, NPT, NmuT ensembles), Macromolecules, Proton Titration, Widom Analysis etc.