Search Results for "computer science" - Page 3

Showing 130 open source projects for "computer science"

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  • 1

    P3BSseq

    Parallel processing pipeline for analysis of bisulfite sequencing data

    Bisulfite sequencing (BSseq) processing is among the most cumbersome next generation sequencing (NGS) applications. Though some BSseq processing tools are available, they are scattered, require puzzling parameters and are running-time and memory-usage demanding. We have developed P3BSseq, a parallel processing pipeline for fast, accurate and automatic analysis of BSseq reads that trims, aligns, annotates, records the intermediate results, performs bisulfite conversion quality assessment,...
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  • 2
    Buildes

    Buildes

    A designer’s program for describing parts of the building

    Buildes is an integrated development environment that assists the user in creating building information. It reads a text (session) file from which it compiles the information. It then allows the user to browse, analyze and export the resulting building knowledge. The compilation system is written in pure Python. The building components created are rendered in PythonOCC. The GUI is written using PyQt.
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  • 3
    FAST Simulations

    FAST Simulations

    An Open source Analysis and SImulation Toolbox for Fuel Cells

    FAST is an Analysis and Simulation Toolbox (FAST) for Fuel Cells (FC) FAST-FC is the doctorate work of David B. Harvey and was developed with support from the U.S. DOE, Ballard, and Queen's University. Derivative works of FAST-FC include FC-APOLLO which is a forked branch of this project intended to capture the code state at the exit of the funded DOE project. FAST-FC is the open and active community branch. FAST-FC is developed and maintained by the original creator and...
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  • 4

    ExAM-Exome_Analysis_And_Mining

    A whole exome sequencing analysis package and its graphical interface

    During the past few years, whole exome sequencing has imposed itself for genetic research, largely due to its use for detection of causative mutations responsible for Mendelian disorders. As a consequence of their power and of the rapidly decreasing cost of these technologies, massive amount of exome sequencing data are generated and becoming available to a broadening community of scientists. However, these data remain difficult to analyze and interpret by the general scientific community,...
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    Brain Workshop

    Brain Workshop

    Python implementation of the Dual N-Back mental exercise

    Brain Workshop is a Python implementation of the Dual N-Back mental exercise. This exercise is the only mental activity that has been scientifically shown to improve your short-term memory (working memory) and fluid intelligence.
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    Downloads: 276 This Week
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  • 6

    Ionflux Computer Graphics Toolkit

    Toolkit for 2D and 3D computer graphics

    NOTICE: This repository of IFCG will no longer be maintained. You can find the current version at https://github.com/TehFlux/ifcg The Ionflux Computer Graphics Toolkit is a collection of libraries for 2D and 3D graphics processing. The toolkit is written primarily in C++ and has full Python bindings for all components.
    Downloads: 0 This Week
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  • 7

    Admin UI for a Field Observation Server

    Vbox machine for server_admin

    Administrative User Interface for a Field Observation Server: It's a administrative web app built with Django for storing citizen science data and has support for uploading the collected data to an RESTful archive server. It has features including (1) registration of contributors; (2) a new GUI to allow scientists with minimal computer knowledge to add, sort, and delete observations; (3) support for uploading a photo to a specific observation; (4) support for displaying GPS information in a map field; (5) support for validating the correctness of the format of the observation data; (6) support for uploading a selected subset of observation data via Internet to a private server for preservation. ...
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  • 8
    GCompris : I got IT

    GCompris : I got IT

    Educational Software for children aged 2 to 10.

    GCompris is a high quality educational software suite comprising of numerous activities for children aged 2 to 10. Some of the activities are game oriented, but nonetheless still educational.
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    Downloads: 38 This Week
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  • 9

    CoLabR

    A simple user interface to the R software environment.

    A simple user interface to the R software environment. It is designed for people new to R and provides the user with easy access to their variables and data along with pointers to the most basic commands. It also allows for multiple people to share data across different sessions on different machines. In this way it also offers a collaborative environment for people to work together in remote locations.
    Downloads: 0 This Week
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  • 10

    ReorJS

    Distributed Computing with JavaScript

    Create your own distributed computer that can distributed javascript based applications to any computer with a web browser, headless browser or node.js installation. For more information and updates please see our website - http://reorjs.com.
    Downloads: 0 This Week
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  • 11
    NanoCap

    NanoCap

    Carbon Fullerene and Capped Nanotube Generator

    NanoCap is a generic application for the construction of low energy fullerene and capped nanotube structures. It provides an ideal tool to accompany the study of finite carbon molecules using computer simulation. The implementation involves a standalone application which includes a GUI and allows for dynamic visual inspection through 3D rendering. In addition, the NanoCap core libraries can be used in custom Python scripts that enabled the user to produce structures in bulk or to include the...
    Downloads: 1 This Week
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  • 12

    PyVision Computer Vision Toolkit

    A Python computer vision library

    PyVision is a object-oriented Computer Vision Toolkit for researchers that contains vision and machine learning algorithms and algorithm analysis and easily interfaces with scipy/numpy, PIL, opencv and other computer and machine learning libraries.
    Downloads: 0 This Week
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  • 13

    YEI 3-Space Motion Capture Studio

    A motion capture application utilizing the YEI 3-Space Sensor family.

    The YEI 3-Space Mocap Studio is an open source motion capture application that uses the YEI 3-Space Sensor™ units. The interface is similar to other motion capture applications (e.g. Blender), but is more convenient in getting started with the 3-Space Sensor units since the application was created for them. It automatically searches for 3-Space Sensor units already in use by the computer on start-up of the application and can load in previous sessions that saved off 3-Space Sensor...
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  • 14

    LabCrab

    A little tool to manage Computer Science labs in colleges

    LabCrab makes it easy to manage Computer Science laboratories, by providing tools to manage practical task lists and question papers. It's not complete yet. While it's fairly stable, there are a few flaws and missing features.
    Downloads: 0 This Week
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  • 15

    CLUE - C Learning Undergrad Environment

    Tools to support the learning of the C programming language

    CLUE (C Learning Undergraduate Environment) is a software allowing students to work on assignments in the C language while benefiting from support for peer testing, hyper-linked tutorials to help them understand compiler error messages, detection of "novice errors" with warnings hyper-linked to tutorials. Sponsored by National Science Foundation under award CCLI #0836863.
    Downloads: 1 This Week
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  • 16

    WebChemViewer

    A simple program for sharing molecular structures with associated data

    Sharing lists of molecular structures with associated chemical properties is a common task in computer-aided drug design and medicinal chemistry. WebChem Viewer is a simple, free, open-source program that generates HTML-formatted output that can be viewed in any modern web browser, on any operating system (including mobile), without requiring the installation of additional software. The output can also be easily incorporated into existing web pages. WebChem Viewer is released under the...
    Downloads: 0 This Week
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  • 17
    TaskManager

    TaskManager

    TaskManager manages calculation jobs in a computer cluster environment

    TaskManager is an open source infrastructure software for distributing and managing calculation jobs in a Unix computer cluster environment. The TaskManager was designed to control the utilization of a set of hosts even if you are not the administrator of the system. The hosts are embedded in a Unix environment and the user's home directories are mounted on each host. The hosts may have different numbers of CPUs/cores and different kernels. Keep in mind that a user is able to log into each...
    Downloads: 2 This Week
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  • 18

    ProximityForest

    Efficient Approximate Nearest Neighbors for General Metric Spaces

    A proximity forest is a data structure that allows for efficient computation of approximate nearest neighbors of arbitrary data elements in a metric space. See: O'Hara and Draper, "Are You Using the Right Approximate Nearest Neighbor Algorithm?", WACV 2013 (best student paper award). One application of a ProximityForest is given in the following CVPR publication: Stephen O'Hara and Bruce A. Draper, "Scalable Action Recognition with a Subspace Forest," IEEE Conference on Computer...
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  • 19
    Cyber Knight is a game engine for developing educational software for computer science. The platform features an isometric tile engine and a code visualizer for python.
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  • 20
    Flightdeck-UI is a project that utilizes the ideas from the design of aircraft controls and instruments for creating computer user interfaces, such as for monitoring.
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  • 21
    EDACC
    Experiment Design and Administration for Computer Clusters. Latest source code on http://github.com/edacc
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  • 22
    openfablab

    openfablab

    Open Source FabLab Project

    Software script assembly to be executed on cnc machines and robots to build, maintain and replicate open source fablab. Here software meets hardware.
    Downloads: 0 This Week
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  • 23

    Experiment manager

    Computer science experiment manager

    experimaestro is an experiment manager, and is composed of (1) a job scheduler that handles dependencies and locking (2) a modular experiment description framework, that allows easy description of the various parts of an experiments.
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  • 24
    GISBox by Citiviz

    GISBox by Citiviz

    Ready-to-use appliance for GIS, Data Mining and Analysis, Modelling...

    GISBox by Citiviz is a ready-to-use virtual appliance containing an assortment of powerful, free and open source GIS, Data Mining and Analysis, Modelling and Programming software and packages. The pre-configured and tested GISBox allows you to try and use in few minutes a variety of software used by data scientists, engineers, physicists, mathematicians, geomatics engineers, and geographers from around the globe, without installing anything more than once the Oracle VirtualBox™ software...
    Downloads: 0 This Week
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  • 25

    CogPy

    Cognitive Python

    Cognitive Python is a cross-platform library for designing and conducting psychological experiments in Python. A few of its main features are: - A full-featured 2D display library for rapid development - Full control of computer I/O (display, mouse, keyboard, gamepad, joystick, audio) - Advanced library of data collection techniques - Data export to NumPy/SciPy, R, MATLAB, and Microsoft Excel - Compatibility with PyACT-R for cognitive modeling If you are interested in...
    Downloads: 0 This Week
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