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ECMWF parser is a software made in python (it has a version standalone and another python dependant) to work on the data provided by ECMWF. It uses WGRIB to convert binary data to ascii and operates over the last with several functions available.
Wizard-like software to run experimental procedures (at large). Each step of the procedure is a file (document, on-line form, checklist, video, program... ). Experimental data and documents are backuped together. NEW: templates of procedures
Wizard-like software to manage a scientific repository (articles or any digital document). Citation information(BibTeX) is automatically corrected. From the repository, get copies of items, list of references+citations. NEW:handles real documents.
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VISPA is a novel development environment for high energy physics analyses, based on a combination of graphical and textual steering. The main goal of VISPA is to support users in prototyping, performing, and verifying a data analysis of any complexity.
The Protein Geometry Database hosts the development code for a flexible database for searching protein geometry, as well as a library for accessing this data for protein modeling & refinement programs.
pyastrolib is a python library providing professional astronomers a robust set of tools for astronomical data analysis. This project will provide all the functionality as NASA's IDL Astronomy User's Library in addition to other planned features.
ptsa (pronounced pizza) stands for Python Time Series Analysis. A python module specifically designed with neural data in mind (EEG, MEG, fMRI, etc...), but applicable to almost any type of time series.
A database and a web front end for physiologic data on animal feeding, developed with PostgreSQL and Django at NESCent (http://www.nescent.org) for Mammalian Feeding Working Group (http://www.feedexp.org).
Current development of the codebase is on Github at http://github.com/NESCent/feedingdb.
Open Source Particle Image Velocimetry and PIV Analysis
OpenPIV is an initiative of scientists to develop a software, algorithms and methods for the state-of-the-art experimental tool of Particle Image Velocimetry (PIV) which are free, open source, and easy to operate.
ESML is an interchange technology that utilizes external metadata to allow applications to plug and play seamlessly with Earth Science specific datasets in heterogeneous formats.
Gnupylot is a GUI for gnuplot (the widely used multi-OS plotting utility). It's written in Python using PyQt4 libraries. With Gnupylot you can save your plots (even the datasets). It's still in Alpha stage.
DICOM Tag Slayer lets you view, modify, export and find differences in DICOM-format files. Program is multiplatform, written in Python+PyQT4+PyDICOM gives you both GUI and CLI for easier script integration.
Reviewing memory allocation and data structures of an extant Sourceforge project unix-named "simupop". A new development version of the extant project is established and the ultimate goal is to "rev up" the old, hence the project name.
GraphicalOSfp is a python application which aims to collect random data issued by remote systems in IP and TCP sequences. These data are then displayed in a 3D referencial to highlight an attractor of the random engine of the remote machine.
nexml is an xml format that represents phylogenetic data (trees, character sequence alignments, sets of OTUs, substitution models). The format is inspired by the commonly used flat-file NEXUS format, but more robust and easier to process.
Methods and testing of methods for automatic analysis of in situ cyclic
voltammetry data.
This, at least initially, is the code from my masters thesis, which was
done as a contribution to a larger project called Aevum. Aevum is being
developed at t
Python software package for 3D tracking of leg joints in walking insects. Published as Bender et al., PLoS ONE, 2010 (http://dx.doi.org/10.1371/journal.pone.0013617)
Powow is an open-source TCP packets exchange mesh. It allows many TCP clients to connect to a "Powow cloud" (several instances of Powow), to exchange data. Powow is a TCP socket server like Palabre or Oregano.
PyOSG is a python wrapper for the OpenSceneGraph. Version number corresponds to the version of OpenSceneGraph that PyOSG should work with (e.g. PyOSG 2.8 should work with OpenSceneGraph 2.8.x). Still in early stages, so email mday299 if any problems!