Search Results for "modules" - Page 14
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Showing 523 open source projects for "modules"
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FineSplice
Enhanced splice junction detection and estimation from RNA-Seq data
...Multiple mapping reads with a unique location after filtering are rescued and reallocated to the most reliable candidate location. FineSplice requires Python 2.x (>= 2.6) with the following modules installed: pysam (http://code.google.com/p/pysam/) and scikit-learn (http://scikit-learn.org/). For further details check out our publication: Nucl. Acids Res. (2014) doi: 10.1093/nar/gku166 -
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PyTIAClient
A Python client for receiving TIA data streams.
PyTIAClient implements the TIA (TOBI Interrface A) protocol to connect to a TIA server and receive data streams. It is written in pure Python and only depends on modules from the standard Python library. -
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Bika Open Source LIMS
Web based Open Source laboratory information management system (LIMS)
Modern Open Source LIMS (Laboratory Information Management System) · Professionally supported by experts The Bika code was migrated to https://github.com/bikalims Getting Started: https://github.com/bikalims/bika.lims/blob/main/README.md Modern Bika releases are built on the Senaite LIMS core, the LIMS that originated as a Bika fork. It is therefore as new and modern as Senaite, frequently upgraded and has many very useful add-ons. Bika expands on Senaite's lean design by adding modules for bulk sample importing, two tier Sample Point Locations, instrument result importers extra COA templates etc. while remaining within ISO 17025 guidelines Other differentiation is per lab discipline, e.g. branches for environmental management, health care, geochemistry snd cannabis. User Manual: www.bikalims.org/new-manual Videos: www.bikalims.org/resources/bika-lims-videos Screenshots: www.bikalims.org/resources/screenshots Supported by Bika Lab Systems, www.bikalabs.com -
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DiagSim
Diagnostics simulation for particle accelerators
DiagSim is a collection of Python modules for simulating beam diagnostics in particle accelerators, at the moment only cavity BPMs, with other types of BPMs and other diagnostics to follow. Or so we think. Anyway, we use beam data exported from beam trackers, trace the signals through the diagnostics and processing, so that they can be processed as real data, and the input and measured beam parameters can be compared. -
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SaveSafe
A small, lightweight backup plan managing tool.
...The development guide is coming soon and will be available on the project wiki to ensure unity between the different development environments. EDIT :: At first, the project was intended to be written in Lua, but because I couldn't find the proper modules that pleased me, I chose Python over Lua. -
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Regression Suite
Test suite with unit regrssion and execution statistics
...Essentially, RegressionSuite provides the frame-work around which the individual unit regressors are invoked (and details and statistics collected). Unit regressors are grouped into named regressor sets (or modules), and regressors are created by implementing specific regressor interfaces. These two features make regressors particularly amenable to testing analytics (and other similarly state-light) modules. -
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...https://deity-online.com/ Visit us there. --- Deity (pronounced "DEE-ity") is a GameMaster (i.e. role-playing) utility. It has a large generic component plus modules to refine it for different game systems (e.g. HarnMaster, HERO, AD&D) and to simulate weather, combat, character generation, etc. Important: Just released v0.9 breaks database compatibility with v0.8. I don't think this actually affects anyone (since as far as I know, nobody is actively using this but me) but wanted to make that clear. ...
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KMG Kernel Module Configurator
A minimal python GUI that helps to manage modules in a linux system.
KMG helps you to manage: activation/disactivation of modules startup list blacklist and it has an unique feature: it can save a snapshot of the system's modules configuration and restore it later. All the actions are traced in a dedicated log section. The GUI also gives details on the selected module. -
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PynDora
Python WebServer Log File Analyzer
...It is going to support multiple log files from any date and output the statistics in html formatted files, incorporating automatically build charts. It will be a pure python solution which is going to be self contained, ie no installation will be required other from the standard python modules. -
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GalGen Trader
A 2D Elite-style game written in Python 3.2.
GalGen Trader is (or at least will be) a 2D space trading and exploration game set in a complex and persistent procedurally-generated universe. Dwarf Fortress in space, if you will. One of its most important features is the ability for extension modules to be added that can change just about any feature of the program; from new weapons and devices, to adventure modules that add new 'mini-plots' (similar to the Galactic Adventures DLC for Spore), to modules that replace parts of the core game. This functionality is supported by the game being written in Python 3, with its powerful support for including external code at run-time. ... -
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Openscad Seamless Compiler
Precompiles openSCAD files to include online modules
ATTENTION! Make sure you hit the correct download button. There is some BAD advertisement that tries to misdirect you. For download use this link: https://sourceforge.net/projects/openscadseamlesscompiler/files/latest/download and wait 5 seconds. Precompiles openSCAD files to include online module. Distributed under GPLv2 Github: https://github.com/Phaiax/openscad-seamlesslib-client Servercode on Github: https://github.com/Phaiax/openscad-seamlesslib-client -
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PyDoodles
Assorted Mini-Modules for Python
PyDoodles is a set of assorted "mini-modules" for the Python programming language. It's a collection of small ideas combined to create reusable code that is bound to come in handy for someone somewhere. -
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AMBIENT
Find active modules in metabolic networks using high-throughput data
...If you wish to use the version used in the paper it is v0.6.3, however I recommend using the latest version which works in the same way but with additional options and has stability and performance improvements. Thanks for your interest! AMBIENT (Active Modules for Bipartite Networks) is a Python module that uses simulated annealing to find areas of a metabolic network (modules) that have some consistent characteristic. AMBIENT does not require predefined pathways and gives highly specific predictions of affected areas of metabolism. For example, scores for reactions based on transcriptional data of their annotated encoding genes can be used in the network and modules of coordinated expression changes can be found. ... -
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The sandbox libraries (libsandbox & pysandbox) are an open-source suite of software components for C/C++ and Python developers to create automated profiling tools and watchdog programs. The API's are designed for executing and instrumenting simple (single process) tasks, featuring policy-based behavioral auditing, resource quota, and statistics collecting. The sandbox libraries were originally designed and utilized as the core security module of a full-fledged online judge system for...
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BRAHMS is a Modular Execution Framework for dynamical systems. It knits together independently-authored software modules implementing dynamical processes into an integrated system, and supervises the deployment and execution of that system.
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GEPETTO - Gene Prioritization in Java
GEPETTO (GEne Prioritization ExTended TOol)
...It takes advantage of the data integration capabilities in the SM2PH-Central Framework(KD4v,MSV3d,BIRD,..), combined with in-house developed gene prioritization methods. It currently incorporates six prioritization modules, based on gene sequence, protein-protein interactions, gene expression, disease-causing probabilities, genomic context). GEPETTO is written in Java/Python and supported by an advanced modular architecture, which means that it can easily be modified and extended by the user, in order to include alternative scoring methods and new data sources. ... -
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Another distribution of apache that contains Apache, MySQL, Perl, and PHP. and comes with the following modules mod_perl, mod_php, mod_python, and more. Also Contains a FTP and Mail Server. Will be ready to run right after installation and a reboot.
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pykb
Python Killboard Platform for EVE Online
...Caching exists in two forms, a basic in memory dict based caching system suitable for single process tasks and integration with uwsgi's powerful and fast built in cache. Utility modules are provided for adding in killmails, backfilling killmails and dumping them via the command line. These also serve as reusable code for web apps or at least as usage examples. A sample web app using pykb is included. -
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GNU Build Packages for SCons
Build GNU tools with SCons
A package of scripts that allow you to use the SCons build tool to build software that usually uses the GNU Autotools. -
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KSR10 USB Python controller
Control the KSR10 Robot Arm (Velleman) through USB with Python.
This project aims to control the KSR10 Robot Arm (Velleman) through USB with the programming language Python. Requirements: - Python (tested with version 2.6 and 2.7) - modules: pyusb (wich on itself requires libusb or openusb) -
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ldapsync
A MemberAdapter and cronjob to contact an ldap server for mailman
These are two modules: the first is a MemberAdaptor for mailman that reads a file of members for each mailing list. The other is a cronjob that contacts an ldap server and * writes an aliases file for each user that has uid and mail entries in ldap, to be used with postfix * maintains lists that are defined via ldap with GroupOfNames and write the files for the first module If the ldap server is inaccessible, the files are left in place, so mails still get delivered. -
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SabayonControlCenter
The SCC is meant to help the user to control his system.
One could compare the SabayonControlCenter with Mandrivas Control Center. This mainly hits the point but they are technically far away from each other. Planned features depending on so called "Modules" which can be sripts or other programms. Even the Desktops own utilitys are handled as such. "So the SCC simply calls Systemfools!" No, not entirely. It uses these parts and can download and install them if needed. For most other actions like managing you OpenRC or view/save/upload your logs the SCC had its own code. At the moment you can use the SCC to view and save some logs, call some KDE utilitys and use the ModManager to query some informations about the Modules. ... -
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jLab est une plate-forme scientifique destinée à être l'outil de travail privilégié des étudiants, enseignants, ingénieurs, scientifiques et chercheurs. jLab est totalement modulaire et facilement extensible via un système de modules
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OTFBot(OTFBot the friendly Bot) is a modular IRC-Bot written in python. It is very easy to extend using python modules.
