Showing 8 open source projects for "obd source code"

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  • 1

    DCT

    Diffraction Contrast Tomography analysis code

    Diffraction contrast tomography code base, as developed by researchers from beamline ID19 of the ESRF, Grenoble, France, and Manchester University, UK.
    Downloads: 1 This Week
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  • 2
    easy-dhpsf

    easy-dhpsf

    GUI for fitting 3D single-molecule images using the double-helix PSF

    This package of MATLAB routines with accompanying GUI allows scientific users to measure the 3D location of single molecules when using the double-helix point spread function (DH-PSF) widefield microscope. Version 2 also includes code that facilitates combining localization data from two spectral channels using a locally-weighted quadratic 3D registration function Features - Double-Gaussian estimator is calibrated via an axial scan of bright immobile fluorescent emitters (e.g. beads) -...
    Downloads: 0 This Week
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  • 3
    PRIN-3D (PRoto-code for Internal flows modeled by Navier-Stokes equations in 3-Dimensions) is a CFD code written in MATLAB, with turbulent and reactive capabilities.
    Downloads: 0 This Week
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  • 4
    NSB entropy and mutual information estimator; applications to the analysis of neural code.
    Downloads: 0 This Week
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  • 5

    rebind

    Lattice simulation of biochemical reactions and diffusion

    This site hosts code investigating the role of spatial heterogeneity in biochemical signaling. Motivated by several biological examples, we study the behavior of covalent modification networks when the activating component is localized to a planar membrane in either a random or clustered configuration. Reactions and diffusion are implemented on a three-dimensional lattice.
    Downloads: 0 This Week
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  • 6
    Gafgui
    A Matlab code to characterize and analyze Gafchromic film for radiotherapy applications. Single or dual color analysis (respectively for EBT or EBT2 film types). Accurate uncertainty estimations. Requirements: Matlab (min. ver. 2007a), Image toolbox.
    Downloads: 0 This Week
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  • 7
    Code no longer maintained here, but now transferred to GitHub: https://github.com/peterlu
    Downloads: 0 This Week
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  • 8
    Excited Energy Levels and Various Shapes (EELViS) was developed for calculation of the Extended Tao-Eldrup model results. The relation between potential well dimensions and positronium (Ps) lifetime can be calculated using this code.
    Downloads: 0 This Week
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