Search Results for "git:/git.code.sf.net/p/docfetcher/code"
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Showing 22 open source projects for "git:/git.code.sf.net/p/docfetcher/code"
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Ultrashort Pulse Propagator
A powerful simulation for designing femtosecond lasers and amplifiers.
...Disclaimer: The simulation code is provided free of charge for the use of the academic community only. We kindly ask the users to acknowledge use of the code in academic settings. We do not accept responsibility for any errors or omissions that may be present. Çağrı Şenel, Punya Prasanna Paltani, Fatih Ömer Ilday -
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CFDTool - CFD & OpenFOAM GUI Toolbox
CFDTool - Easy to Use Computational Fluid Dynamics (CFD) Toolbox
CFDTool - "CFD Simulation Made Easy" CFDTool is a fluid dynamics toolbox for modeling and simulation of flows with coupled heat transfer. Based on FEATool Multiphysics (https://www.featool.com), CFDTool is specifically designed to make advanced fluid mechanics and heat transfer simulations both easy and enjoyable. - Completely stand-alone and cross-platform self-contained toolbox - Optionally use as MATLAB Add-On toolbox - Fully integrated and easy to use MATLAB GUI - Modeling and... -
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FEATool Multiphysics - FEA Toolbox
FEATool Multiphysics is an easy to use FEA and CFD Simulation Toolbox
FEATool Multiphysics (https://www.featool.com) is a fully integrated, flexible and easy to use physics and Finite Element Analysis (FEA) simulation toolbox. Developed with ease of use in mind, everyone is able to set up and perform complex multiphysics simulations in a simple GUI without learning coding, programming, or scripting. In addition to built-in FEM and PDE solvers, FEATool features full integration with the high performance SU2, OpenFOAM, and FEniCS physics solvers, functioning... -
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Virtual Reflectometer
Simulates basic reflectometer scans with X ray tracing.
...The pogram serves as an educational tool for explaining alignment and for a proper overillumination correction of XRR data. !!Paper will be referenced!!. VR can be run by code in Matlab or as a standalone app. It's not necessary to have Matlab installed on your computer if you want to use the standalone app (Download button). You can find a documentation in the wiki tab. The program is freshly released. So feedback is very welcome in order to improve it. You can write a discussion entry in the wiki tab or write me a mail to elias.hils@uni.kn -
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Stoner-Wohlfarth hysteresis
Hysteresis of ellipsoidal single domain ferromagnetic particle.
...Zsolt Szabó, Amália Iványi, Preisach Type Bulk Vector Hysteresis Model from Generalized Elementary Vector Hysteresis Operators In: Preisach Memorial Book: Hysteresis models in mathematics, physics and engineering. 211 p. Budapest: Akadémiai Kiadó, 2005. pp. 77-88. Developed by: Dr. Zsolt Szabó These softwares are "as-are" and carries no warranty. They can be used under GNU licence without restriction for research and education purposes. Bug reports: Szabó Zsolt, szabo.zsolt@itk.ppke.hu Updated: February 17, 2017. -
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DCT
Diffraction Contrast Tomography analysis code
Diffraction contrast tomography code base, as developed by researchers from beamline ID19 of the ESRF, Grenoble, France, and Manchester University, UK. -
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This is a standalone program for a) the calculation of diffusion coefficients of sorbates inside nanoporous materials at different loadings by using transition rate constants and for b) solving the master equation for a system consisted of a large number of unit cells per each direction. It is based on the following published paper "Kolokathis, P. D., Braun, O. M.. J. Comput. Chem. 2019, 40, 2053– 2066. DOI: 10.1002/jcc.25857"
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easy-dhpsf
GUI for fitting 3D single-molecule images using the double-helix PSF
This package of MATLAB routines with accompanying GUI allows scientific users to measure the 3D location of single molecules when using the double-helix point spread function (DH-PSF) widefield microscope. Version 2 also includes code that facilitates combining localization data from two spectral channels using a locally-weighted quadratic 3D registration function Features - Double-Gaussian estimator is calibrated via an axial scan of bright immobile fluorescent emitters (e.g. beads) - DH localization is performed through template matching and subsequent double Gaussian fitting - Tiff stacks of SM images are analyzed using template matching followed by double-Gaussian fitting to extract estimates of the molecule positions - Two spectral channels are registered by generating a locally-weighted quadratic mapping function from control point pairs -
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iTides
an internal tide generation GUI (in Matlab)
With the support of the NSF and ONR over the past few years we have developed a MATLAB tool that calculates the internal wave field generated by barotropic tidal flow of a nonlinearly stratified fluid past any arbitrary two-dimensional topography of finite extent You can download a recent version as a .zip file or get up-to-date version via the svn version (svn checkout svn://svn.code.sf.net/p/itides/svn/trunk itides-svn). -
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AnalyzeNNLS
MRI Multiple Echo T2 Analysis
...JMR 206:200-4 (2010). Temporal Phase Correction included in version 2.5. If you use this functionality, please reference: Bjarnason TA, Laule C, Bluman J, Kozlowski P. JMR 232:22-31 (2013). -
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Migration of cells in a social context
Model of the migration of 3T3 fibroblast cells in social context
Code updated. There were a few errors in the physical model of the concentration field of secreted chemokine surrounding each cell, together with a few coding errors. All have been corrected, the model refitted, and all simulations presented in the paper repeated. Results from this corrected model are on par with the published results. -
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RFlex
Spectroradiometer control for shipborne reflectance measurements
...The software incorporates GPS signal parsing, control of the sensor platform viewing angle (stepper motor control), sensor triggering and data recording. Continue to the download section for the latest release information Rrs data processing code (the 'fingerprint technique') is also available - but moved to my github page: https://github.com/StefanSimis -------- Oct 2014: a beta version is available (20141006) Sep 2014 news: The latest version is 20140723, addressing some bugs. See the change log. Enjoy! Two Rflex units collected over 30,000 validated Rrs spectra on the Baltic Sea this year! ... -
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PRIN-3D (PRoto-code for Internal flows modeled by Navier-Stokes equations in 3-Dimensions) is a CFD code written in MATLAB, with turbulent and reactive capabilities.
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PAMELA Schrodinger-Poisson Code
self-consistent schrodinger-poisson code for core-shell nanowires
PAMELA (Pseudospectral Analysis Method with Exchange & Local Approximations) is a self-contained suite of MATLAB codes that can calculate electronic energies, densities, wavefunctions, and band-bending diagrams within a self-consistent Schrödinger-Poisson formalism. -
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easyNRG
A simple MATLAB implementation of Wilsons NRG-method
...There is only implicit parallelisation implemented by vectorizing the time consuming parts of the code. This code is licensed under the CC BY-SA 3.0 license (http://creativecommons.org/licenses/by-sa/3.0/, http://creativecommons.org/licenses/by-sa/3.0/legalcode) -
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Lattice Gauge Theories
Mini-research project on lattice gauge theories.
...Gauge theories are incredibly important in current theoretical research and allow for the seach of symmetries. The bulk of the project will consist on a LaTeX document that tries to explain the concepts at hand. Some MATLAB/Octave code might be used to illustrate some problems. -
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rebind
Lattice simulation of biochemical reactions and diffusion
This site hosts code investigating the role of spatial heterogeneity in biochemical signaling. Motivated by several biological examples, we study the behavior of covalent modification networks when the activating component is localized to a planar membrane in either a random or clustered configuration. Reactions and diffusion are implemented on a three-dimensional lattice. -
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A Matlab code to characterize and analyze Gafchromic film for radiotherapy applications. Single or dual color analysis (respectively for EBT or EBT2 film types). Accurate uncertainty estimations. Requirements: Matlab (min. ver. 2007a), Image toolbox.
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Excited Energy Levels and Various Shapes (EELViS) was developed for calculation of the Extended Tao-Eldrup model results. The relation between potential well dimensions and positronium (Ps) lifetime can be calculated using this code.
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TPs
Mini-projets dealing with numerical physics.
This project is used to share code between collaborators on several projects pertaining to a class Numerical Physics class taken at Université Laval during the semester of Winter 2012.
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