Search Results for "vivo"
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Showing 2 open source projects for "vivo"
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mCarts
A hidden Markov model to predict clustered RNA motif sites
... of in vivo RBP binding sites obtained from high throughput sequencing of RNAs isolated by cross-linking and immunoprecipitation (HITS-CLIP). We applied this algorithm to study two representative RBPs, Nova and Mbnl. Despite the very low information content in individual motif elements, our algorithm made very specific predictions for successful experimental validation. -
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CIMS
Crosslinking induced mutation site analysis
... in vivo protein-RNA interactions at single-nucleotide resolution from HITS-CLIP data. Nat. Biotech. 29:607-614.
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