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    MGEScan is a suite of two software tools MGEScan-LTR and MGEScan-non-LTR. MGEScan-LTR is a software that can identify new LTR retrotransposons without relying on a library of known elements. It uses approximate string matching technique and protein domain analysis to detect intact LTR retrotransposons. In addition, it identifies partially deleted or solo LTRs using profile Hidden Markov Models (pHMMs). MGEScan-non-LTR is a software for the identification of non-LTR retrotransposons in genomic sequences, following a computational approach inspired by a generalized hidden Markov model (GHMM). ...
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  • 2

    Simple Fast Dictionary

    Simple, small and fast dictionary lib on C

    The library does quick search of dictionary words in arbitrary input strings. Known problems are known. :) See appropriate section in documentation. Also, only ASCII words and strings for now.
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  • 3
    The "Lib45" string search library provides routines that generate fast string searching code at run-time. The library is written in Assembly language for Intel 32bit CPUs.
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  • 4
    Run-time library functions for processing assignment instructions (including options parsing) in C, C++, Perl and Bourne shells. For power and flexibility, regular expressions are supported in identifying the instructions.
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