Search Results for "java workflow"

Cap analysis of gene expression (CAGE) is a sequencing based technology to capture the 5’ ends of RNAs in a biological sample. After mapping, a CAGE peak on the genome indicates the position of an active transcriptional start site (TSS) and the number of reads correspond to its expression level. CAGE is prominently used in both the FANTOM and ENCODE project. MOIRAI is a compact yet flexible workflow system designed to carry out the main steps in data processing and analysis of CAGE data....

Cress (Communication Representation Employing Systematic Specification) allows graphical description of a wide variety of services such as in data communications/telecommunications, but Cress is not limited to this. The approach allows services to be described graphically as (work)flows of activities. Cress diagrams are automatically translated into formal languages for rigorous analysis and verification, and are also automatically translated into implementation languages for deployment...

Processing of smallRNA-Seq data to gather biologically relevant information requires application of multiple statistical and bioinformatics tools from different sources, each focusing on a specific step of the analysis pipeline. The analytical workflow can be challenging for the continuous interventions by the operator, a critical factor when large numbers of datasets need to be analyzed at once. To allow a flexible and comprehensive analysis of smallRNA-Seq data we designed a novel modular...

SWAMP is a flexible, java based workflow server that runs on top of tomcat. It reads its workflow definitions from XML files. Administration and tracking of workflow instances, execution of individual tasks can be done via the web and SOAP interfaces.

A complete server platform for business: web, database, portal, ecommerce, intranet, office, email, virtual office/VPN, security, groupware, CMS, CRM, workflow. Apache, LAMP, WAMP, J2EE, Zope, Webware,Perl,Python, jk2, portal kit, portlet, accounting/ERP

A tool for the development and customization of an information system for traceability and workflow management of virtually any business process or product.