Search Results for "cap"

COHCAP (City of Hope CpG Island Analysis Pipeline, pronounced "co-cap") is an algorithm to analyze single-nucleotide resolution methylation data (Illumina 450k methylation array, targeted BS-Seq, etc.). Please note: 1) The SourceForge version of COHCAP is no longer being updated. Please see the GitHub version: https://github.com/cwarden45/COHCAP This was the source repository for the Bioconductor version, with some changes after the decision to only provide the code through GitHub. 2) In addition to the original NAR paper, please see the following links: Benchmarks: http://www.nature.com/protocolexchange/protocols/2965#/introduction Protocol Exchange Files: http://sourceforge.net/projects/cohcap/files/Protocol_Exchange_Example.zip 3) Custom Annotation Files (including EPIC Array): https://sourceforge.net/projects/cohcap/files/additional_Bioconductor_annotations.zip/download

Cap analysis of gene expression (CAGE) is a sequencing based technology to capture the 5’ ends of RNAs in a biological sample. After mapping, a CAGE peak on the genome indicates the position of an active transcriptional start site (TSS) and the number of reads correspond to its expression level. CAGE is prominently used in both the FANTOM and ENCODE project.

The Cluster Administration Package (CAP) means to ease integration, configuration, and systems management. It is the "glue" that allows administrators to leverage existing technologies in a framework of information management, control, and installa

The perl module CGI::Application::Plugin::DBIProfile is a plugin for the CGI::Application web application framework. It provides DBI Profile information (see DBI::Profile) as both textual reports and graphed output.

The perl module CGI::Application::Plugin::DBIProfile is a plugin for the CGI::Application web application framework. It provides DBI Profile information (see DBI::Profile) as both textual reports and graphed output.

The Cluster Administration Package (CAP) is meant to ease integration, configuration, and systems management for clustering. It is the "glue" that allows cluster administrators to leverage existing technologies in a functional framework.