Showing 650 open source projects for "java-orm"

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  • 1

    x2fasta

    Tools for reformatting common sequence formats into fasta

    A collection of tools to transform common biosequence formats (e.g. EMBL, SWISS-PROT, UniProtKB, GenBank and RefSeq) into the fasta sequence format.
    Downloads: 0 This Week
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  • 2
    FSA is a probabilistic multiple sequence alignment algorithm which uses a "distance-based" approach to aligning homologous protein, RNA or DNA sequences.
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    Downloads: 1 This Week
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  • 3
    P2P for Smartphone - Android Gnutella

    P2P for Smartphone - Android Gnutella

    Mobile P2P App - Use a P2P App on your Smartphone

    This Project shows how to create a mobile smartphone app with a gnutella p2p application. It consits of smartphone java sourcecode, documentation, phex source code, phex proxy and instructions to create a working app. This project once was coded with only 2000€ buget and has given revenue of over 30.000€. Happy hacking the java,perl,php code. Other projects: https://www.artikelschreiber.com/en/ https://www.unaique.net/en/ https://www.unaique.com/ https://www.artikelschreiber.com...
    Downloads: 0 This Week
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  • 4

    MaLe-PSI-BLAST

    Machine Learning tuning of NCBI PSI-BLAST

    PSI-BLAST is a powerful tool for capturing homologues. However, after several iterations, the Position Specific Substitution Matrix (PSSM) built by the program may score poorly the query and its homologues. Therefore, PSI-BLAST was tuned with Machine-Learning tools.
    Downloads: 0 This Week
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    PlaTypUS

    PlaTypUS

    Plasmodium Typing Utility Software

    The goal of PlaTypUS is to establish a unified Plasmodium whole genome analysis tool, that aligns short read sequences in an agreed upon manner, with many quality control steps, and calls both SNVs and CNVs in a community agreed standard way. We also seek to provide this analysis in a stand-alone graphic user interface so that labs around the world can analyze their own whole genome sequencing data, rather than relying on outside institutes.
    Downloads: 0 This Week
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  • 6
    TreeBASE is a database and web front end that stores phylogenetic trees and the data matrices used to generate them. The current iteration comprises a complete rewrite of the schema and web layer, and will include a web services layer.
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  • 7
    LocalServer

    LocalServer

    LocalServer is a Web Server software for windows

    LocalServer is a Web Server software for Windows that allows you to make your Computer into a Web Server Locally in which there is the Apache Server, PHP, and MySQL Server, which has been summarized in a single container setup.exe. The advantages of this software is Free except you do not need to advance other similar software, which is installed by default on your computer, because the Apache Server and MySQL Server will be installed on LocalServer first time on a different port, the...
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    Downloads: 4 This Week
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  • 8

    [DEPRECATED] Gene Ontology

    The DEPRECATED legacy location of the GO, see http://geneontology.org

    The DEPRECATED legacy of the Gene Ontology project on SourceForge. Please see http://geneontology.org for current software and downloads.
    Downloads: 8 This Week
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  • 9
    MassBank System is a mass spectral database system. The system includes a database server, a search engine, web service interfaces and maintenance tools.
    Downloads: 0 This Week
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  • 10
    InproTK

    InproTK

    An Incremental Spoken Dialogue Processing Toolkit

    InproTK is an Incremental Spoken Dialogue Processing Toolkit, that is, a toolkit to help you build dialogue systems that listen and talk incrementally, allowing for advanced interactional behaviour. Please see our Wiki for more information: http://sourceforge.net/p/inprotk/wiki/
    Downloads: 0 This Week
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  • 11

    ViewDix

    Android UI for off-line dictionary viewer

    Small Android application that provides access to dictionary index. The index provides full list of words and full list of articles. The list of words is searchable by prefix. Words may have alternative writings (kana-kanji in Japanese). The indexes are created separately and may have different sets of dictionaries.
    Downloads: 0 This Week
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  • 12

    RemoteRoot

    Web based management tool for unixes

    Remote Root is an enterprise-class central management tool for Linux, which enables centralized configuration management of a large amount of network connected Linux-based computers (hosts) in a modular form. It is an open source software system relying on operation of traditional operating systems, so it is capable of managing numerous free and commercial Linux distributions or even not Linux-like systems (such as Solaris, HP-UX, FreeBSD, OpenBSD). It can manage every system on which the...
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  • 13
    This project develops an open source editor for Clavia Nord Modular and Micro Modular synthesizers.
    Downloads: 1 This Week
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  • 14
    CLucene is a C++ port of Lucene: the high-performance, full-featured text search engine written in Java. CLucene is faster than lucene as it is written in C++.
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    Downloads: 235 This Week
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  • 15
    Audited Objects (AO) is a tool for the analysis and optimization of automated software processes such as builds. It supports reuse of previously built objects, generation of prerequisite data, parallelization, etc.
    Downloads: 0 This Week
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  • 16

    MatrixMaker

    Custom substitution matrix creator

    Create custom substitution matrices for BLAST protein search. Easy to use GUI based application.
    Downloads: 1 This Week
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  • 17
    Technical analysis library with indicators like ADX, MACD, RSI, Stochastic, TRIX... includes also candlestick pattern recognition. Useful for trading application developpers using either Excel, .NET, Mono, Java, Perl or C/C++.
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    Downloads: 10,369 This Week
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  • 18

    ss7mon

    ss7mon an SS7/SIGTRAN signalling monitor

    ss7mon will implement the following features for SIGTRAN and SS7 family of protocols: - Message sniffer. - Call flow tracing. - Traces DB. - Distributed tracing. - QoS monitoring. - KPI monitoring. - Web interface. - CLI command line interface. - ...etc.
    Downloads: 0 This Week
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  • 19
    NOTE: UBMoD is no longer actively developed and we encourage you to download Open XDMoD as a replacement for UBMoD. Open XDMoD has been developed to provide detailed information on resource utilization and performance for academic and industrial HPC centers. More information is available at http://xdmod.sourceforge.net/ UBMoD is a data warehouse and web portal for mining statistical data from resource managers in high-performance computing environments. UBMoD presents resource...
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  • 20
    Miscellaneous Source Code useful for systems administration of both Windows and Linux machines. Very random collection of small tidbits of code.
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  • 21
    The system is designed to upload phishing emails to a database where they are automatically analyzed and customized reports can be generated. UnMask was developed by ECIT Labs, Dept of Computer Science, FSU. The director of the Lab is Dr. Sudhir Aggarwal. UnMask has substantial on-line help features and should mainly be self-explanatory.
    Downloads: 0 This Week
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  • 22

    WHATCH'EM

    WHATCH’EM simulates mosquito container water temperature

    WHATCH’EM simulates the highly non-linear manner in which atmospheric conditions and container characteristics determine water temperature and height, leading to results that are not always intuitive and likely not simulated by simpler empirical models. WHATCH’EM has the capacity to be utilized for other mosquitoes and other container-inhabiting arthropods.
    Downloads: 0 This Week
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  • 23

    C-Lesh and SMW Engine

    C-Lesh is a game programming language for 2D games.

    C-Lesh is a game programming language for 2D games - mainly arcade and platform games. When combined with the Super Mario World (SMW) engine you can create awesome 2D platform games like Super Mario World. This language evolved from a "clone" of TI-BASIC which I began developing when I was having memory (segmentation fault) bugs with C. C-Lesh lacks memory allocation and destruction. There is no need to use pointers and you can never get memory leaks or program crashes caused by memory...
    Downloads: 0 This Week
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  • 24
    PSTL-FW4EX
    This project aims to develop software around FW4EX, an infrastructure for mechanized grading. Currently five sub-projects exist: a C client for SCiTE, two Java clients for Eclipse and two authoring plugins for Eclipse. And, now, a pair-programming server.
    Downloads: 0 This Week
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  • 25
    Open-source weather database system for storage of weather/water observations, forecasts, analysis fields, and hindcasts. includes loading program for GRIB files. Visit project website (http://wdb.met.no) for further information. Please note: this project has now moved to http://wdb.met.no
    Downloads: 0 This Week
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