Search Results for "java projects on linux" - Page 4
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Showing 749 open source projects for "java projects on linux"
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CSBB-v2.0
Computational Suite for Bioinformaticians and Biologists
CSBB is a command line based bioinformatics suite to analyze biological data acquired through varied avenues of biological experiments. CSBB is implemented in Perl, while it also leverages the use of R, java and ruby in background for specific modules. Major focus of CSBB is to allow users from biology and bioinformatics community, to get benefited by performing down-stream analysis tasks while eliminating the need to write programming code. CSBB is currently available on Linux, UNIX... -
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epyunit
PyUnit and PyDev extensions for arbitrary Executables
The package 'epyunit' provides extensions for PyUnit and PyDev. * Extensions for PyUnit - Unittests for arbitrary executables. * Extensions for PyDev - Automation of search and load of pydevd.py The extensions are applicable from commandline and/or within Eclipse. Online manuals: - https://pythonhosted.org/epyunit/ PyPi repository: - https://pypi.python.org/pypi/epyunit Current application examples are: - bash-core - http://bash-core.sourceforge.net Nickname -... -
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SIGAR (System Information Gatherer and Reporter) is a cross-platform, cross-language library and command-line tool for accessing operating system and hardware level information in Java, Perl and .NET.
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ViralFusionSeq [VFS]
Accurately discover viral integration events and fusion transcripts
VFS was fullly tested under Ubuntu/Debian system. ** Announcement 1**: VFS is superior to Virus-Clip. https://sourceforge.net/projects/viralfusionseq/files/VFS.vs.Virus-Clip.pdf/download As of 2016, VFS is the only viral integration tool available at NIH HPC system. https://hpc.nih.gov/apps/ViralFusionSeq/ ViralFusionSeq (VFS) is a versatile high-throughput sequencing (HTS) tool for discovering viral integration events and reconstruct fusion transcripts at single-base resolution... -
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The Software Testing Automation Framework (STAF) is a framework designed to improve the level of reuse and automation in test cases and test environments. The goal of STAF is to provide a complete end-to-end automation solution for testers.
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CMake BASIS
Build system And Software Implementation Standard
The CMake Build system And Software Implementation Standard makes it easy to create sharable software and libraries that work together. This is accomplished by combining and documenting some of the best practices and utilities available. More importantly, BASIS supplies a fully integrated suite of functionality to make the whole process seamless! Check out the web site for more information. The Git repository of this project is hosted on GitHub. Some interesting facts about this project... -
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Lascer liefert zu einer Menge binär klassifizierter Attribut-Vektoren eine Menge von Regeln zur Beschreibung der Klassen. Die Regeln können auch mathematische Funktionen enthalten, deren Art vorgegeben werden kann.
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JOPUX
JOPUX - a flexible and scalable application platform!
JOPUX is a Linux-distribution and family of free open source Linux appliances, built on openSUSE and Gnome, and designed for quickly setup and running Linux on servers and workstations. With a fully documented library of resources, JOPUX allows the customization of every aspect of a Linux installation and cloning, including administration and the rapid integration with third-party applications JOPUX provides more developer power while making the user experience all the more friendly... -
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NexStarCtl
Cross platform Perl API to control NexStar compatible telescopes
... on the base of the hand control. For extended example how to use this perl module look in to the distribution folder for nexstarctl.pl. This program is a complete console tool to control NexStar telesctopes based on NexStarCtl module. To control network based telescopes nexbridge must be used on the remote site. https://sourceforge.net/projects/nexbridge/ -
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Placnet
Placnet project
Plasmid Constellation Network project. Placnet is a new tools for plasmid analysis in NGS projects. Placnet has been written in Perl. It's been optimized to work with Illumina sequences but it also works with 454, Iontorrent or any of the actual sequence technologies. The input of placnet is a set of contigs and one or more SAM files with the mapping of the reads against the contigs. Placnet obtains a set of files, easily opened on Cytoscape software or other network tools. Please cite... -
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MGSyn
MGSyn - Automatic Synthesis for Industrial Automation
... instructions on installing and using the tool. It is advised to use 32-bit version (Eclipse) associated in the "MGSyn supplementary files", as the 64-bit version will by default demand huge memory, which may lead to Java exceptions. -
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BioC
We describe a simple XML format to share text documents and annotation
A minimalist approach to share text documents and data annotations. Allows a large number of different annotations to be represented. Project files contain: - simple code to hold/read/write data and perform sample processing. - BioC-formatted corpora - BioC tools that work with BioC corpora BioC goals - simplicity - interoperability - broad use - reuse There should be little investment required to learn to use a format or a software module to process that format. We are... -
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Cress Tool Suite
Cress is a comprehensive toolset for graphical service/workflow design
... and validation. Cress aims to make service design as easy as possible without requiring specialist development knowledge. It simplifies service creation to drawing diagrams, clicking buttons and defining a few tool parameters. All key functions of Cress can be controlled from the Chive diagram editor. Cress is written using portable and widely used languages (Perl and Java). It can be extended by a developer for other kinds of services that can be characterised by activity flows. -
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TRON-DELTA.ORG
Nongovernmental Intelligence Organization
Project "TRON-DELTA.ORG" (Nongovernmental Intelligence Organization) includes any work to be done to publicize, to carry out our projects and to run our headquarters. -
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PLP
Powerfull pre-processor
Powerful Verilog Preprocessor. PLP stands for Perl Pre-processor. Perl is used as "control language" that is embedded in the Verilog code (or any other code) to generate code on the fly. It is used commonly as a Verilog pre-processor but can be used with any target/output language (C, C++, Java, VHDL, plain text etc) -
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GMOD is a set of interoperable open source software components for visualizing, annotating, and managing biological data. See http://gmod.org for more.
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Clue is an experimental C compiler that generates code for high-level dynamic languages such as Lua, Javascript, Perl5 and Common Lisp, as well as non-dynamic languages like C and Java. It supports the complete ANSI standard, including pointer arithmetic
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Collaborative infrastructure for Collaborative Product Development (manufacturing) within Extended and Virtual Enterprise.
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CleanCode
.NET, PowerShell, SQL, Java, Perl, and Javascript developer libraries
Develop clean code with our .NET components (plus PowerShell, SQL, Java, Perl, and JavaScript components as well!). CleanCode highlights include user controls, a validation engine, a diagnostic system, an XML/HTML pre-processor, and a variety of articles on code design. -
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We have implemented a core summarizer of scientific articles written in Spanish, with the following components: a tokenizer, a grammar checker, a clarity checker, a cohesion-coherence checker, a common-topic extractor and an output formatter.
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quattor is a system administration toolkit providing a powerful, portable and modular toolsuite for the automated installation, configuration and management of clusters and farms running UNIX derivates like Linux and Solaris. Quattor no longer uses SourceForge for hosting, please see http://github.com/quattor for source code and http://www.quattor.org for more up-to-date information about the project.
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MARF is a general cross-platform framework with a collection of algorithms for audio (voice, speech, and sound) and natural language text analysis and recognition along with sample applications (identification, NLP, etc.) of its use, implemented in Java.
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Platform-independent recursive search library. C-API, written in C/C++, with mappings to C++, COM, D, Java, .NET, Python, Ruby, STL, with more to come.
