Showing 283 open source projects for "track 1 2"

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  • 1
    UMLS::Query is an umbrella for projects that create measures of semantic similarity for the biomedical domain. Our current project is UMLS-Interface and UMLS-Similarity. Our JBI-2007 article was based on Semantic-Similarity and Snomed-Interface.
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  • 2
    WebKNotes is a Web-based knowledge/notes database. WebKNotes 1 was written in Perl and used a directory hierarchy for storage. WebKNotes 2 is under development, and is entirely client side Javascript.
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  • 3
    WebDAV CGI

    WebDAV CGI

    WebDAV CGI brings your file service to the Web.

    WebDAV CGI brings your file service to the Web and is moved to github [https://github.com/DanRohde/webdavcgi/]. WebDAV CGI adds a modern Web interface and WebDAV to file systems like AFS, NFS, CIFS/SMB, EXT, GFS, and so on. It preserves existing file permissions by using a included setuid/setgid wrapper.
    Downloads: 0 This Week
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  • 4
    LinuxTLE

    LinuxTLE

    LinuxTLE (Revival)

    LinuxTLE(Linux Talay) is the legendary Thailand Linux Distribution lost technology from NECTEC. Now, reborn out of demise, LinuxTLE has finally build the 11.0 version code named "Cha-Am" revived the dead project by the mysterious successor. Shifted from GNOME2 into Mate Desktop which supported both Thai & English languages. LinuxTLE 11.0 currently based from Ubuntu 16.04 LTS. There will be also Debian 9.0 based build soon. "Talay(ทะเล)" means "The Sea" pronounced in Thai...
    Downloads: 1 This Week
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  • 5

    ISVASE

    identification of sequence variant associated with splicing event

    To generate correct mature mRNAs, the exons must be identified and joined together precisely and efficiently by RNA splicing mechanism. It is to be noted that about one third or a half of all disease-causing mutations effect RNA splicing. However, there is little bioinformatics tools to directly identify sequence variants associated with splicing events (SVASE) based on RNA-seq data. We developed ISVASE, a simple and convenient tool for identifying SVASE directly using RNA-seq data. Comparing...
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  • 6
    BupBox

    BupBox

    Simple backup software for home or small-office use

    BupBox is a suite of tools for building a "backup appliance" capable of serving a home or small office. It is optimized for one and only one use case: a pool of PCs push backups to a master BupBox server, which then mirrors to other remote BupBoxes. If this sounds like your situation, you couldn't make a better choice ; )
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  • 7
    Dochazka

    Dochazka

    Generic attendance/time tracking system

    Dochazka (the Czech word for "attendance") is a generic system for keeping records and generating reports of the daily activities for a group of people. In the typical use case, the activities would be work-related and the group of people would be employees, and the data could be used for assuring compliance with labor legislation.
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  • 8
    It's a web application which provides a unify solution to stat. CVS/SVN repository modules code change information and generate html reports. User can browse line of change, file of change, code diff, check-in comment and so on, it can stat. more repository modules one time. After repository modules configured, stat. is simple like a search.
    Downloads: 0 This Week
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  • 9

    Stat cvs/svn Code Change

    stat. cvs,svn code changes and generate html report

    It's a web application which provides a unify solution to stat. CVS/SVN repository modules code change information and generate html reports. User can browse line of change, file of change, code diff, check-in comment and so on, it can stat. more repository modules one time. After repository modules configured, stat. is simple like a search. It's the mirror project of CodeChangeViewer: http://sourceforge.net/projects/ccv/.
    Downloads: 0 This Week
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  • 10

    openSEQ

    NGS compute distro proloaded with pipeline analysis software

    Forked Ubuntu 14.04 minimal install with XOrg and FluxBox desktop environment for web-based pipeline construction and job submission. HOWTO: 1) Set VM network settings to a bridged adapter type. 2) Load VM to client 3) From host: $ ssh -X ubuntu@<foobar> 'firefox && butterfly.server.py --unsecure' --- passwd = 616287xx 5) or ssh into host with X forwarding, and type runme This will launch an X-session of Firefox on the client, which will then be forwarded to the host...
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  • 11
    Wap Auto Index Advance

    Wap Auto Index Advance

    Auto Index wap is Advance of Download Portal (Multi Language)

    Djamolwap 13v -Advance Auto Index With Web Admin Panel + Multi Language + Themes ||||||||||||||||||||||||||||||||||||| New Updates ||||||||||||||||||||||||||||||||||||| - Multi Language Website 1) English 2) Urdu 3) Gujrati 4) Russian - User/Visitor manual change language website - Multi Language Plugin On/Off - Added Function in Admin Panel - Automatic All Mp3 Tag Setting Added _____________________________________________ Official Website : http://ai.djamol.com Demo...
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  • 12
    miRNA Temporal Analyzer (mirnaTA)

    miRNA Temporal Analyzer (mirnaTA)

    Differential expression analysis tool for miRNAs in temporal studies

    ..., and the normalized data is analyzed using linear regression model to locate any miRNAs which are differentially expressed in a linear manner. Any miRNAs with P-value<0.05 are considered statistically significant. Remaining miRNAs which did not fit in linear model are further analyzed in two different methods: (1) if the number of time points <3, CDF of the normal distribution, and (2) if the number of time points is >= 3, ANOVA is utilized. http://www.gigasciencejournal.com/content/3/1/20
    Downloads: 1 This Week
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  • 13

    tView

    An Image Viewer that currently perform basic image viewing operation

    An Image Viewer that currently supports basic image viewing and only works with shortcut keys so far (like arrow keys, Ctrl+o), 1) Event based architecture 2) Multi threaded 3) Logical File name Sorting 4) Plugin based architecture (Todo)
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  • 14

    CSV2QIF

    Converts CSV formatted file to QIF for a few Dutch banks

    ..., Texaco,... payee is changed to "gasstation" and category to "expenses:gas" 2. Allows transfers between accounts in GnuCash 3. Any specific appearance of account number is converted to one specific GnuCash account Example: nl96ingb0007654321 and 7654321 are both converted to "Asset:Bank:ING7654321" 4. Prevents double booking by specifying a priority in accounts. 5. Converts various security names into one uniform security name (see for more details end of csv2pl file)
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  • 15
    ... in genomic sequences, following a computational approach inspired by a generalized hidden Markov model (GHMM). References: 1. M. Rho et al., "De novo identification of LTR retrotransposons in eukaryotic genomes", BMC Genomics (2007) 8:90. 2. M. Rho and H. Tang, "MGEScan-non-LTR: computational identification and classification of autonomous non-LTR retrotransposons in eukaryotic genomes", Nucleic Acids Research (2009) 37:21.
    Downloads: 0 This Week
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  • 16
    A collection of software made by Milos Rancic.
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  • 17

    Automatic Compound Processing (AuCoPro)

    Automatic compound splitting and semantic analysis of compounds

    ... analysis of compounds; as such, the project will be divided into two interrelated subprojects, to be executed simultaneously. The focus in this project will be on Afrikaans (with Dutch as the closely-related, well-sourced language), which will lay grounds for future work on other closely-related language pairs.
    Downloads: 0 This Week
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  • 18

    TrackNode

    SNMP-Based Network Node Polling Suite

    TrackNode is designed to become a robust, extensible architecture for polling arbitrary system metrics over SNMP. This project is still in early experimental phases, so functionality is limited (the current code is more of a PoC than anything else). No warranties are provided for the functionality of this code. The licensing agreement for this code may be found at http://creativecommons.org/licenses/by-nc-sa/3.0/. All rights not expressly conveyed within the license agreement are...
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  • 19

    hrefinder

    Detection of homologous recombination events from SNP data

    This software detects homologous recombination events (HREs) from SNP data. Based on SNP alleles calls and locations, it breaks the genomes into locally colinear blocks, and looks for cases where SNPs do not agree with the vertical pattern of inheritance in a phylogeny. It applies a dynamic programming algorithm to model whether changes within a block are likely a result of mutations, sequencing errors, or HRE. We use information from the nearby SNPs, so that if 1-2 alleles in a series of SNPs...
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  • 20

    HPeak

    A HMM-based algorithm for defining enriched regions from ChIP-seq data

    ... HUMAN/MOUSE -format BED -pe TREATMENT.inp -c CONTROL.inp -n OUTPUTPREFIX -isize 200 -r 100 -pec (if control is PE) -ann -wig -seq –interfiles note: 1. Default species is HUMAN. Also supports MOUSE. Can add any other genome if in need. 2. Default format is BED. Also support ELAND. Will add SAM and BAM. 3. –r specifies read length (this is import through my experience). 4. –pe indicates pair-ended data. 5. If data is pair-ended, -isize refers to insert size (total length of a pair).
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  • 21
    TheBible

    TheBible

    An Offline Portable Bible

    The Bible is an offline portable bible which contains all the features needed for a bible student. Some of the features of TheBible which makes it unique are: 1. It is as tiny as 3.5 MB and its portable. 2. it has no dependencies. 3. It works on all windows systems from win98 to win8. 4. Passage lookup feature which gives you the very feel of using a bible. 5. Keyword search feature which allows you to search for a specific keyword and get all the results in the bible. 6...
    Downloads: 1 This Week
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  • 22

    amDesktop

    Desktop toolbar and tools for bare X environment

    For Italians: visit the project website at: http://amdesktop.sourceforge.net/ amDesktop is designed to complete environment with very light window manager (jwm, for example) with a set of widget: 1) an applicantion panel, icons supported and customizable. 2) a GUI wireless 3g connection enabler 3) a network manager No resident program will be on your RAM: this is the mail goal of the project but it is also a disadvantage because of the latency... You have to install several package...
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  • 23
    avestafonts

    avestafonts

    Avestan Unicode Fonts

    The glyph outlines origin from Yasna 10 of the manuscript of Tehran University Library, nr. 11263. The scanned manuscript can be viewed under Ave976 on wwww.avesta-archive.com In the manuscript long [i] and long [u] do not differ, as well as both short and long [o]. Nevertheless, long [u] and short [o] are mapped in the font. Their outlines follow the script style of the manuscript. The letters for [θ] and [x] have two different shapes in the manuscript, so I have added one of each...
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  • 24
    Always more than one-way script based nms plugins. Nagios add-on project with plugins and tools.
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  • 25

    CPU Balance

    User-based CPU quota tool

    CPU Balance is a Perl script to balance the CPU usage among users. It will allocate CPU resource to each user equally only by the command renice, no matter how many processes/threads a user runs. ################ # Basic Renice Goal ################ 1. User-based balance: every user get the same cpu percentage if they ask for more; 2. all the jobs of one user has the same NI; 3. NI of all jobs tend to move as large as possible when balanced; 4. No sudden change on NI. max change...
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