This software collection is for a DNA sequencing laboratory. It is used to design closure/finishing reactions following a shotgun sequencing experiment. It requires a draft assembly composed of contigs and scaffolds.
This software is a set of tools that hides C sourcecode in txt files. Also the software is able to restore the txt files to C sourcecode again. This work is based on the tool c2txt2c by Leevi Martilla. Csteg needs a book file in txt format to hide C so
blat(mat) is a Braille to print translator for maths. It takes a Spanish Six-dot Mathematical Braille (not Nemeth Code) text and converts it to an HTML file ready to be translated into XHTML+MathML by ASCIIMathML (javascript).
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AutoPrime allows to rapidly design primers for real-time PCR measurement of eukaryotic expression.
By connecting to the EnsEMBL database gene structure information is used to find primers spanning exon borders. This way only expressed sequences are captured. Additionally mispriming on repetitive regions can be avoided using information from RepBase.
The FrameCode.NET project is a collection of articles and sample code in all kinds of programming languages that point out hints, tips, tricks, samples, and much more. Articles are community driven and are provided by the public!
This project focuses on generating a C++ code with the help of the user interface diagram. The user will have facility to create an UML diagram. once the user is finished the diagram, the design part can be generated to a C++ code.
Comprehensive & high performance data distribution &transformation system. Features a simple, user-friendly event driven scripting interface transparently generates & execs highly efficient Perl/C code. Uses:ETL,datawarehousing,statistics,data-cleansing.
The Introspector enables the programming tools that deal with sourcecode such as the compiler to communicate in a standard and neutral manner reducing the accidental cost of programming. http://github.com/h4ck3rm1k3/
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unPIC is a Perl script that disassembles Microchip microcontroller's HEX files. This is a powerful tool for all reverse engeneers that creates a well understandable assemblysource from a binary file. Creates xrefs, labels, subroutines and much more...
yacdiff shows differences between sourcecode files. It helps developers to identify fast the differences. The shown differences may be colorized differently depending on the context. Its outputs are HTMLs or text with special chars for ANSI terminals.
Provide Perl object management with a framework similar to STL. Includes a class producer to generate the code for the main member functions incl the ctor, data member accessor funcs, clone, swap, copy ctor, and singleton class type producer.
Project Naranja will uses Padlock Security of VIA EPIA mini-ITX motherboards in order to provide a toolkit to set up and use encrypted filesystems with Linux. NOTE: Files are now hosted at Google Code: http://code.google.com/p/naranja/
Boiler-template (source) file generator. Automates (source) file generation from template files: speeds up developement of redundant or re-usable software and more. An example template for Linux Kernel Device Drivers generation, is included.
Given YACC-like and LEX-like input files, yagg generates a C++ program that generates all strings of a user-specified length. yagg is easy to use, and provides a means of generating test inputs or validating a parser grammar by inspecting the strings.
Ethereal Realms, a concept chat and role play system that has acquired additional components such as social networking, galleries and message boards. The code borrows themes from Plenty of Fish, Elfwood/Gallery and the defunct WBS.
gmuck assists you in generating valid (X)HTML by examining the sourcecode that generates it. It is not a replacement for real validation tools, but is handy in quick checks and in situations where validation of the actual markup is troublesome.
Target of this project is to code a network scanner which creates the nagios config automatically. Therefore the administrator starts the scanner with an ip address and the scanner results the open ports. nagioscanner provides a web based gui (cgi based)
Twaffy is a tool for developing web based components which are easily combined into web applications. Twaffy's robust Code Factory generates entire components (HTML templates, Perl Modules, and SQL scripts) from user defined specifications.
MacroWeb is a website development utility that intends for rapid web site building and to ease the web site maintainence. It uses a pre-processing template/macro system to build website frameworks and to achieve content management.
PerlBB (Perl Bulletin Board) is an attempt to create a feature rich and fully scaleable forum / blog host system that requires no additional database support. The main project goals are efficiency / performance and ease of code extension.
Visual GUI programmer for Attiny26 microcontroller for outputting assembly, assembling into hexedecimal and uploading to hardware with an intuitive interface (Tekbots-OSU).
kebap is the long-awaited Perl IDE. It currently uses nedit as text- and macro-engine and ships with a wx GUI. It consists of a tree-view based file-manager for the code repositories of a project. A plug-in API allows extending kebap in perl.