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APLAWS is an Open Source Content Management System. The system has been designed to help UK authorities deliver services online as part of the Office of the Deputy Prime Minister's Local Government Online programme.
DNA sequencing quality values, base calling and trace processing
Tracetuner is a tool for base and quality calling of trace files from DNA sequencing instruments. Originally developed by Paracel, a Celera Business, this code base was released as open source in 2006. TraceTuner was used by Celera to call 30+ million reads from both Drosophila and human genome sequencing projects. In 2000, Applied Biosystems bundled TraceTuner with ABI3700 Genome Analyzers and shipped it to the customers of these capillary electrophoresis sequencers. Later versions of...
hxRender is a 2D graphics library built around OpenGL for rendering, and may be used with SDL for window setup. It was designed in mind to replace SDL's antiquated rendering methods.
Open Live Support aims at providing a free platform independent chat support system. The system currently works as a live chat support system. The team is currently working on integrating remote control capabilities to the system.
Atlantida is an open source multilingual dictionary written in Java. It can translate words from one language to another and pronounce them. As of version alpha 0.15, Atlantida uses XDXF dictionary format.
GeneKeyAPI contains two related but independent programs. Updater.GKDB is a robust push-of-a-button updater for GeneKeyDB (GKDB). Bio.GKDB allows the user to easily access elements of GKDB without needing to know the schema or making SQL queries.
Transform your applications and workflows into powerful agentic systems at global scale.
Gemini Enterprise Agent Platform lets you rapidly build, scale, govern and optimize production-ready agents grounded in your organization's data. The platform enables developers to build custom or pre-built agents for virtually any use case. New customers get $300 in free credits.
Actor provides a web-enabled, self-service user interface to run your scripts. You run a desktop application to setup your scripts in Actor. Your users get a web site where they access your scripts in a controlled, fail-safe manner.
Java Slideshow is a platform independent image viewer especially for huge collections. It provides an easy command line interface, supports tagging and view by category, zoom, move and has some file manager functions like delete file or find duplicates.
The system is designed for the automated analysis of high throughput sequencing data. At present Aped is focused on the analysis of data derived from Sanger and 454 sequencing. Additional functionality exists for SAGE and taxonomic profiling.
A framework for transferring implicit or tacit knowledge between members of a community. It works by observing the behavior of community members, and providing them with suggestions from other community members based on their past behavior.
The Flow Cytometry Laboratory Information Management System (FlowLIMS) is a web-based software system that gives users the ability to create and manage experiment protocols for the DiVa and FACScan flow cytometers
Build scripts/wrappers around the YUI Compressor implemented for popular languages like PHP, Python, Java, Bash, Perl, etc. The scripts will track down and compress all JavaScript and CSS files within a given project tree.
DIY Genomics is an open source bioinformatics consortium intended to bring a collection of tools and libraries into the hands of small scale genomics labs for the process of sequence assembly and annotation. Projects include DIYA, MGAP, CRISPR, and DIYGV
YES Linux a distribution that is focused on ease of use, user experience, and the internet. In 3 screens a secure server is installed and administered from a browser. A user should not have to use the console, but can if they wish.
RoofTop is a network/systems monitoring (NSM) tool that leverages SNMP standards to deliver critical health and performance monitoring through device based reports and graphs, event notifications, alerts, and configurable alarm thresholds.
N-Browse is a client-server package for interactive visualization of network data with heterogeneous types of links, intended for ease of use and designed using a generic database schema for data integration and visualization.
Data and animal management software for large-scale phenotype screening Used by GNF for mouse ENU mutagenesis project. Data visualization & analysis, animal husbandry management, & automated QTL mapping. Usable as stand alone animal husbandry system.
The Electronic Laboratory Notebook (ELN) - a collaborative, web-based analog of the paper notebook. The ELN can be used to share and record text, images, 3-D molecular structures, live graphs, etc. and can be extended to support additional data types.