Easy-to-Use business intelligence (BI) for all
Pentaho tightly couples data integration with business analytics in a modern platform that brings together IT and business users to easily access, visualize and explore all data that impacts business results. Use it as a full suite or as individual components that are accessible on-premise in the cloud or on-the-go (mobile). Pentaho Kettle enables IT and developers to access and integrate data from any source, and deliver it to your business applications, all from within an intuitive and easy to use graphical tool.
The world's leading open source portal
Liferay Portal is the world's leading enterprise open source portal framework, offering integrated Web publishing and content management, an enterprise service bus and service-oriented architecture, and compatibility with all major IT infrastructure.
Rapid data integration framework
Java based data integration framework; can be used to transform/map/manipulate data in various formats (CSV,FIXLEN,XML,XBASE,COBOL,LOTUS, etc.); can be used standalone or embedded(as a library). Connects to RDBMS/JMS/SOAP/LDAP/S3/HTTP/FTP/ZIP/TAR.
The 'ImageJ Plugins' project is a source of custom plugins for the Image/J software. Image/J is a public domain image processing and analysis program developed in Java (http://rsb.info.nih.gov/ij/).
Bio Medical Framework (BMF)
The BMF is a Software Framework developed in Java language for the creation of web applications on the server platform also Open source, in clinical, administrative and management for a healthcare company.
Parallel Iterative Deconvolution is a multithreaded ImageJ plugin for iterative image deblurring.
The aim of phpMedCare is the developement of an "electronic health record" with the target of smaller or specialized hospitals (for example geriatric) and nursing homes (retirement homes). Categories: EHR / EPR / HIS / EPA / KIS
An evaluation framework for assessing contours generated by segmentation algorithms acting on cardiac magnetic resonance (MR) images. These contours are important for clinical assessment of left ventricular volume and mass.
Tools to process and visualize scientific data and images
Teem is a set of ANSI C libraries for manipulation, measurement, and visualization of structured scientific data. Includes N-dimensional image I/O and processing, volume rendering, diffusion tensor processing, ray tracing, PostScript rendering, and more.
The project has moved to GitHub: https://github.com/pixmeo/osirix
dicom related framework and applications in java. The project is divide in 3 parts, the framework, a dicom toolkit, and dicom apps.
Utilities for Patient Data Exchange. A parser for text files to use with some of the utilities provided by the DCMTK from Offis. The purpose is to provide a basic DICOM Modality Worklist Management SCP.
VIKAMINE is a flexible environment for visual analytics, data mining and business intelligence - implemented in pure Java. It features several powerful visualization and mining methods, and can utilize background knowledge.
The Tolven platform and ePHR and eCHR applications enable interoperability across electronic health records for consumers and clinicians. Using Java, EJB3, Faces, Facelets, AJAX, relational database, and LDAP for security.
Chemical structures database & machine learning with web services API
AMBIT offers a cheminformatics data management for chemical substances, structures and nanomaterials. Flexible structure, similarity and study queries storage, descriptor calculation and predictive models building via REST web services.User interface for creating read across assessment and generating reports, aligned with regulatory and industrial requirements. Command line applications also available. Integration with third party tools and databases.
Parallel Spectral Deconvolution is a multithreaded ImageJ plugin for spectral image deblurring.
Hoschedule is healthcare worker scheduling system.That is design working time for physicians,dentists,pharmacists,nurses and medical employees.This project has been tested and successfully implemented at Plaengyao Hospital,Chachoengsao Province,Thailand.
XNBC is a graphic application to simulate biologic neural networks.
XNBC is a full featured application for computer naive neuroscientists. It simulates biological neural networks using graphic tools to edit neurons and networks, to run the simulation and to analyze results. Written in C, it runs on Unix and Windows. Web site : http://ticemed-sa.upmc.fr/xnbc/ All recent versions are on this site.
PL/FLOW is a workflow engine written in Oracle PL/SQL, implementing interfaces 1 and 2 (Process Definition and the client API) as specified by the Workflow Management Coalition. (www.wfmc.org)
Open Legacy Storage Document: Generic Document Archiving on Disk and Network(using MINA) Framework in Java for huge number of docs(up to 2^192 documents), efficient(Java NIO), crypto, net transfert, web retrieve, J2EE and eMail archiving compatible.
ImageJ is a public domain Java image processing program inspired by NIH Image for the Macintosh. It runs, either as an online applet or as a downloadable application, on any computer with a Java 1.1 or later. HOME @ http://rsb.info.nih.gov/ij/
PopED (Population Experimental Design) is a software tool for computing optimal experimental designs. The software has been developed with an emphasis on drug trials based on population models (non-linear mixed effects models).
Value is a complete PHP/MySQL and J2EE middleware / server side accounting system/ERP/CRM geared for users ranging from soho to large corporations.
amilab is a tool for image processing that includes its own scripting language, and an interface for visualizing 2d/3d images and 3d surfaces. Its main application is medical image processing.