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Harmonize + gene = Harmogene Efficiently create sets of genome annotations ("consensus annotations") from one or more source genomes using simple rules and and apply those annotations to one or more target genomes. See the Trac page for more info.
a C++ template framework for run-time dynamic type instantiation
Light-weight Java based Business Rules Engine (BRE) that uses XML as a way to control process flow for an application in an external entity. Soon to comply to JSR 94.
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This is a collection of Perl modules for accessing the Mac OS (Carbon) API. It was designed for use on Mac OS, but is being ported for use on Mac OS X as well.
CAMERA is a research environment and repository for metagenomic data
Command line utility for sorting MP3 files based on Tag information. Written in Perl and available as a stand-alone executable for Windows.1 weekly downloads
This projects intention is to create a series of programs and extensions to allow users of a MUCK server to have 'characters' move across MUCKs located on different servers.
Genzo is an OFBiz generator, designed to help OFBiz implementor creates OFBiz module faster
Get visibility into the health and performance of your entire Cisco ASA environment in a single dashboard. View VPN tunnel status and monitor firewall high availability, health, and readiness. Automatically discover and filter within ACLs, show rule hit counts, and detect shadow and redundant rules. Automate the monitoring and management of your ASA infrastructure in a fully integrated solution. Try it free for 30 days!Advertisement
WAPBlog will allow webloggers to access their weblogs from their mobile phone. Both the Blogger and metaWeblog APIs will be supported. Users will be able to create, edit, and delete posts.1 weekly downloads
File based blogger. Java API. Uses sitemesh and struts. No EJBs. NO JDBC or XML persistence engines. Does RSS feeds with a small footprint (under 32 mb).
With Log4J and the Java logging framework being floodgate-based, I personally still see the need for a bit-masked logging framework, where you not only have categories but actual event types instead of event levels. This will be that framework.
A C++ library for Bayesian computation, including a collection of more generally-applicable utilities.
CryptoPy is a pure python implmentation of cryptographic algorithms and applications. The algorithms are developed for readability more than speed. The collection now includes IEEE 802.11i specific algorithms that generated the test vectors for 802.11i.41 weekly downloads
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Written in PHP and designed to maintain a personal database of bookmarks, Linkerdoodle is a simple link organizer.
JxMenu is an XML based tool for creating Menu's within Java Swing. Developers create XML based configuration files that are then read in by JxMenu and used to create fully functional menu's within Java Swing (AWT may be added later).
The Yap Prolog System is a ISO-compatible high-performance Prolog compiler. Yap is widely considered one of the fastest available Prolog systems. Yap supports coroutining, CLP(QR), CHR, and depth-bound search. Tabling and parallelism are in development.
The purpose of this site is to give a stable home to my addons for the extensible Coranto news publishing system.
CTokenizer accepts C++ syntax as input and outputs a vector of CToken objects, which contain a token string and a(n enumerated) token type, which can then be used to parse the input.
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A java API for comparing XML documents by analysing the sequence of XML events.
Puhssy is a log-file analyzer written in PHP similar to Webalizer or AWStats It takes an apache log and after parsing it saves the results in mySQL or oracle. There's currently only a parsing function for combined logs, but it's easy to write other pa
EZ Transcoder is a wrapper for three pass encoding with mencode designed specifically for for transcoding existing MPEG2 files (such as those captured by a TV Capture card) to DivX/MPEG4 format. It is currently a perl console app.1 weekly downloads
RogueDetect sends out decoy DHCP DISCOVER packets and watches for unauthorized DHCP servers replying on your network.6 weekly downloads
Building a Better and Open-Source Grader in Computer Science Curricula Using Java
Java package to study a clustering model described in the paper \"Novel Clustering Algorithm Based Upon Games on Evolving Network\" by Q. Li, Z. Chen, Y. He and J-P. Jiang (in arxiv: http://arxiv.org/pdf/0812.5064v1), generalizations and similar issues.
Fidonet/FTN SQL Database processing application