Search Results for "bcftools-windows"
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Showing 49 open source projects for "bcftools-windows"
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spaCy
Industrial-strength Natural Language Processing (NLP)
spaCy is a library built on the very latest research for advanced Natural Language Processing (NLP) in Python and Cython. Since its inception it was designed to be used for real world applications-- for building real products and gathering real insights. It comes with pretrained statistical models and word vectors, convolutional neural network models, easy deep learning integration and so much more. spaCy is the fastest syntactic parser in the world according to independent benchmarks, with... -
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Stanza
Stanford NLP Python library for many human languages
Stanza is a collection of accurate and efficient tools for the linguistic analysis of many human languages. Starting from raw text to syntactic analysis and entity recognition, Stanza brings state-of-the-art NLP models to languages of your choosing. Stanza is a Python natural language analysis package. It contains tools, which can be used in a pipeline, to convert a string containing human language text into lists of sentences and words, to generate base forms of those words, their parts of... -
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Stock prediction deep neural learning
Predicting stock prices using a TensorFlow LSTM
Predicting stock prices can be a challenging task as it often does not follow any specific pattern. However, deep neural learning can be used to identify patterns through machine learning. One of the most effective techniques for series forecasting is using LSTM (long short-term memory) networks, which are a type of recurrent neural network (RNN) capable of remembering information over a long period of time. This makes them extremely useful for predicting stock prices. Predicting stock... -
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Python Outlier Detection
A Python toolbox for scalable outlier detection
PyOD is a comprehensive and scalable Python toolkit for detecting outlying objects in multivariate data. This exciting yet challenging field is commonly referred as outlier detection or anomaly detection. PyOD includes more than 30 detection algorithms, from classical LOF (SIGMOD 2000) to the latest COPOD (ICDM 2020) and SUOD (MLSys 2021). Since 2017, PyOD [AZNL19] has been successfully used in numerous academic researches and commercial products [AZHC+21, AZNHL19]. PyOD has multiple neural... -
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AIMET
AIMET is a library that provides advanced quantization and compression
Qualcomm Innovation Center (QuIC) is at the forefront of enabling low-power inference at the edge through its pioneering model-efficiency research. QuIC has a mission to help migrate the ecosystem toward fixed-point inference. With this goal, QuIC presents the AI Model Efficiency Toolkit (AIMET) - a library that provides advanced quantization and compression techniques for trained neural network models. AIMET enables neural networks to run more efficiently on fixed-point AI hardware... -
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FairChem
FAIR Chemistry's library of machine learning methods for chemistry
FAIRChem is a unified library for machine learning in chemistry and materials, consolidating data, pretrained models, demos, and application code into a single, versioned toolkit. Version 2 modernizes the stack with a cleaner core package and breaking changes relative to V1, focusing on simpler installs and a stable API surface for production and research. The centerpiece models (e.g., UMA variants) plug directly into the ASE ecosystem via a FAIRChem calculator, so users can run relaxations,... -
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Lightweight' GAN
Implementation of 'lightweight' GAN, proposed in ICLR 2021
Implementation of 'lightweight' GAN proposed in ICLR 2021, in Pytorch. The main contribution of the paper is a skip-layer excitation in the generator, paired with autoencoding self-supervised learning in the discriminator. Quoting the one-line summary "converge on single gpu with few hours' training, on 1024 resolution sub-hundred images". Augmentation is essential for Lightweight GAN to work effectively in a low data setting. You can test and see how your images will be augmented before... -
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Opacus
Training PyTorch models with differential privacy
Opacus is a library that enables training PyTorch models with differential privacy. It supports training with minimal code changes required on the client, has little impact on training performance, and allows the client to online track the privacy budget expended at any given moment. Vectorized per-sample gradient computation that is 10x faster than micro batching. Supports most types of PyTorch models and can be used with minimal modification to the original neural network. Open source,... -
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Haiku
JAX-based neural network library
Haiku is a library built on top of JAX designed to provide simple, composable abstractions for machine learning research. Haiku is a simple neural network library for JAX that enables users to use familiar object-oriented programming models while allowing full access to JAX’s pure function transformations. Haiku is designed to make the common things we do such as managing model parameters and other model state simpler and similar in spirit to the Sonnet library that has been widely used... -
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PyG
Graph Neural Network Library for PyTorch
PyG (PyTorch Geometric) is a library built upon PyTorch to easily write and train Graph Neural Networks (GNNs) for a wide range of applications related to structured data. It consists of various methods for deep learning on graphs and other irregular structures, also known as geometric deep learning, from a variety of published papers. In addition, it consists of easy-to-use mini-batch loaders for operating on many small and single giant graphs, multi GPU-support, DataPipe support,... -
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DeepXDE
A library for scientific machine learning & physics-informed learning
DeepXDE is a library for scientific machine learning and physics-informed learning. DeepXDE includes the following algorithms. Physics-informed neural network (PINN). Solving different problems. Solving forward/inverse ordinary/partial differential equations (ODEs/PDEs) [SIAM Rev.] Solving forward/inverse integro-differential equations (IDEs) [SIAM Rev.] fPINN: solving forward/inverse fractional PDEs (fPDEs) [SIAM J. Sci. Comput.] NN-arbitrary polynomial chaos (NN-aPC): solving... -
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NeuMan
Neural Human Radiance Field from a Single Video (ECCV 2022)
NeuMan is a reference implementation that reconstructs both an animatable human and its background scene from a single monocular video using neural radiance fields. It supports novel view and novel pose synthesis, enabling compositional results like transferring reconstructed humans into new scenes. The pipeline separates human/body and environment, learning consistent geometry and appearance to support animation. Demos showcase sequences such as dance and handshake, and the code provides... -
13
Flax
Flax is a neural network library for JAX
Flax is a flexible neural-network library for JAX that embraces functional programming while offering ergonomic module abstractions. Its design separates pure computation from state by threading parameter collections and RNGs explicitly, enabling reproducibility, transformation, and easy experimentation with JAX transforms like jit, pmap, and vmap. Modules define parameterized computations, but initialization and application remain side-effect free, which pairs naturally with JAX’s staging... -
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Penzai
A JAX research toolkit to build, edit, & visualize neural networks
Penzai, developed by Google DeepMind, is a JAX-based library for representing, visualizing, and manipulating neural network models as functional pytree data structures. It is designed to make machine learning research more interpretable and interactive, particularly for tasks like model surgery, ablation studies, architecture debugging, and interpretability research. Unlike conventional neural network libraries, Penzai exposes the full internal structure of models, enabling fine-grained... -
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PennyLane
A cross-platform Python library for differentiable programming
A cross-platform Python library for differentiable programming of quantum computers. Train a quantum computer the same way as a neural network. Built-in automatic differentiation of quantum circuits, using the near-term quantum devices directly. You can combine multiple quantum devices with classical processing arbitrarily! Support for hybrid quantum and classical models, and compatible with existing machine learning libraries. Quantum circuits can be set up to interface with either NumPy,... -
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CoreNet
CoreNet: A library for training deep neural networks
CoreNet is Apple’s internal deep learning framework for distributed neural network training, designed for high scalability, low-latency communication, and strong hardware efficiency. It focuses on enabling large-scale model training across clusters of GPUs and accelerators by optimizing data flow and parallelism strategies. CoreNet provides abstractions for data, tensor, and pipeline parallelism, allowing models to scale without code duplication or heavy manual configuration. Its distributed... -
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Imagen - Pytorch
Implementation of Imagen, Google's Text-to-Image Neural Network
Implementation of Imagen, Google's Text-to-Image Neural Network that beats DALL-E2, in Pytorch. It is the new SOTA for text-to-image synthesis. Architecturally, it is actually much simpler than DALL-E2. It consists of a cascading DDPM conditioned on text embeddings from a large pre-trained T5 model (attention network). It also contains dynamic clipping for improved classifier-free guidance, noise level conditioning, and a memory-efficient unit design. It appears neither CLIP nor prior... -
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Sonnet
TensorFlow-based neural network library
Sonnet is a neural network library built on top of TensorFlow designed to provide simple, composable abstractions for machine learning research. Sonnet can be used to build neural networks for various purposes, including different types of learning. Sonnet’s programming model revolves around a single concept: modules. These modules can hold references to parameters, other modules and methods that apply some function on the user input. There are a number of predefined modules that already... -
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MMDeploy
OpenMMLab Model Deployment Framework
MMDeploy is an open-source deep learning model deployment toolset. It is a part of the OpenMMLab project. Models can be exported and run in several backends, and more will be compatible. All kinds of modules in the SDK can be extended, such as Transform for image processing, Net for Neural Network inference, Module for postprocessing and so on. Install and build your target backend. ONNX Runtime is a cross-platform inference and training accelerator compatible with many popular ML/DNN... -
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Neural Tangents
Fast and Easy Infinite Neural Networks in Python
Neural Tangents is a high-level neural network API for specifying complex, hierarchical models at both finite and infinite width, built in Python on top of JAX and XLA. It lets researchers define architectures from familiar building blocks—convolutions, pooling, residual connections, and nonlinearities—and obtain not only the finite network but also the corresponding Gaussian Process (GP) kernel of its infinite-width limit. With a single specification, you can compute NNGP and NTK kernels,... -
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Neural Network Intelligence
AutoML toolkit for automate machine learning lifecycle
Neural Network Intelligence is an open source AutoML toolkit for automate machine learning lifecycle, including feature engineering, neural architecture search, model compression and hyper-parameter tuning. NNI (Neural Network Intelligence) is a lightweight but powerful toolkit to help users automate feature engineering, neural architecture search, hyperparameter tuning and model compression. The tool manages automated machine learning (AutoML) experiments, dispatches and runs experiments'... -
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Alpa
Training and serving large-scale neural networks
Alpa is a system for training and serving large-scale neural networks. Scaling neural networks to hundreds of billions of parameters has enabled dramatic breakthroughs such as GPT-3, but training and serving these large-scale neural networks require complicated distributed system techniques. Alpa aims to automate large-scale distributed training and serving with just a few lines of code. -
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Neural Network Visualization
Project for processing neural networks and rendering to gain insights
nn_vis is a minimalist visualization tool for neural networks written in Python using OpenGL and Pygame. It provides an interactive, graphical representation of how data flows through neural network layers, offering a unique educational experience for those new to deep learning or looking to explain it visually. By animating input, weights, activations, and outputs, the tool demystifies neural network operations and helps users intuitively grasp complex concepts. Its lightweight codebase is... -
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Fairseq
Facebook AI Research Sequence-to-Sequence Toolkit written in Python
Fairseq(-py) is a sequence modeling toolkit that allows researchers and developers to train custom models for translation, summarization, language modeling and other text generation tasks. We provide reference implementations of various sequence modeling papers. Recent work by Microsoft and Google has shown that data parallel training can be made significantly more efficient by sharding the model parameters and optimizer state across data parallel workers. These ideas are encapsulated in the... -
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SVoice (Speech Voice Separation)
We provide a PyTorch implementation of the paper Voice Separation
SVoice is a PyTorch-based implementation of Facebook Research’s study on speaker voice separation as described in the paper “Voice Separation with an Unknown Number of Multiple Speakers.” This project presents a deep learning framework capable of separating mixed audio sequences where several people speak simultaneously, without prior knowledge of how many speakers are present. The model employs gated neural networks with recurrent processing blocks that disentangle voices over multiple...
