Search Results for "scientific"
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Showing 75 open source projects for "scientific"
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SciSpaCy
A full spaCy pipeline and models for scientific/biomedical documents
ScispaCy is a spaCy extension optimized for processing biomedical and scientific text, providing domain-specific NLP models for tasks like named entity recognition (NER) and dependency parsing. -
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PaperAI
Semantic search and workflows for medical/scientific papers
PaperAI is an open-source framework for searching and analyzing scientific papers, particularly useful for researchers looking to extract insights from large-scale document collections. -
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Thinknowlogy
The world's only naturally intelligent knowledge technology
Natural intelligence is the utilization of naturally occurring logic. This naturally occurring logic provides concrete clues for organizing natural objects, like: - Grouping objects that belong together, - Separating objects that don't belong together, - Archiving objects that have become less important. Natural language and spatial information are sources of natural intelligence: - Natural language is providing concrete logic for organizing knowledge objects, - Spatial... -
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OpenNN - Open Neural Networks Library
Machine learning algorithms for advanced analytics
OpenNN is a software library written in C++ for advanced analytics. It implements neural networks, the most successful machine learning method. Some typical applications of OpenNN are business intelligence (customer segmentation, churn prevention…), health care (early diagnosis, microarray analysis…) and engineering (performance optimization, predictive maitenance…). OpenNN does not deal with computer vision or natural language processing. The main advantage of OpenNN is its... -
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modnlp
Modular Suite of NLP Tools
...If you use the tool please consider referencing it using the following article: Luz, S., & Sheehan, S. (2020). Methods and visualization tools for the analysis of medical, political and scientific concepts in Genealogies of Knowledge. Palgrave Communications, 6(1), 1-20. https://www.nature.com/articles/s41599-020-0423-6 -
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TXM
Unicode XML TEI text analysis platform
...rubrique61&lang=en TXM offers a comprehensive range of analysis tools (concordances, collocate search, frequency lists, etc.) based on the powerfull CQP full text search engine (http://cwb.sourceforge.net) and a range of statistical functions (factorial analysis, classification, cooccurrency analysis, etc.) based on R packages (http://www.r-project.org). Read the scientific background at the Textométrie project web site http://textometrie.ens-lyon.fr/?lang=en. Read a full description at the TEI Tools wiki http://wiki.tei-c.org/index.php/TXM. -
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BioNLP is an initiative by the University of Colorado Denver Health Sciences Center to create and distribute code, software, and data for applying natural language processing techniques to biomedical texts
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Aseryla2
Aseryla2 code repositories
This project describes a model of how the semantic human memory represents the information relevant to the objects of the world in text format. It provides a system and a GUI application capable of extracting and managing concepts and relations from English texts. https://aseryla2.sourceforge.io/ -
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MITRE Annotation Toolkit
A toolkit for managing and manipulating text annotations
The MITRE Annotation Toolkit (MAT) is a suite of tools which can be used for automated and human tagging of annotations. Annotation is a process, used mostly by researchers in natural language processing, of enhancing documents with information about the various phrase types the documents contain. MAT supports both UI interaction and command-line interaction, and provides various levels of control over the overall annotation process. It can be customized for specific tasks (e.g.,... -
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MTBook
Machine Translation: Foundations and Models
This is a tutorial, the purpose is to introduce the basic knowledge and modeling methods of machine translation systematically, and on this basis, discuss some cutting-edge technologies of machine translation (formerly known as "Machine Translation: Statistical Modeling and Deep Learning") method"). Its content is compiled into a book, which can be used for the study of senior undergraduates and graduate students in computer and artificial intelligence related majors, and can also be used as... -
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aseryla
Aseryla code repositories
This project describes a model of how the semantic human memory represents the information relevant to the objects of the world in text format. It provides a system and a GUI application capable of extracting and managing concepts and relations from English texts. https://aseryla2.sourceforge.io/ -
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libpostal
A C library for parsing/normalizing street addresses around the world
A C library for parsing/normalizing street addresses around the world. Powered by statistical NLP and open geo data. libpostal is a C library for parsing/normalizing street addresses around the world using statistical NLP and open data. The goal of this project is to understand location-based strings in every language, everywhere. Addresses and the locations they represent are essential for any application dealing with maps (place search, transportation, on-demand/delivery services,... -
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nlpcr
Natural language processing using coroutines in C
Natural language processing using coroutines in C -
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KSUCCA Corpus
A 50 million tokens corpus of Classical Arabic.
King Saud University Corpus of Classical Arabic (KSUCCA) is a pioneering 50 million tokens annotated corpus of Classical Arabic texts from the period of pre-Islamic era until the fourth Hijri century (equivalent to the period from the seventh until early eleventh century CE), which is the period of pure classical Arabic. The main aim of this corpus is to be used for studying the distributional lexical semantics of The Quran words. However, it can be used for other research purposes, such... -
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TIES
A smart search engine for medical documents
TIES (Text Information Extraction System) is a clinical text search engine that uses Natural Language Processing techniques to extract medical concepts from free text clinical reports. It provides secure de-identified access to this information and has in built collaboration tools and honest broker functionality. It is licensed for academic use under the BSD license. For commercial use please contact Nexi at http://nexihub.com *** NOTICE: this software and forum are no longer... -
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Safe Harbor Deidentification
Safe Harbor Deidentification for medical documents
Phalanx - Deidentify Safe Harbor Deidentification Mode of Phalanx is an abridged pipeline of NLP annotators culminating in NER annotators which write output of text offsets. It uses the Safe Harbor deidentification method. -
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Arabic Corpus
Text categorization, arabic language processing, language modeling
The Arabic Corpus {compiled by Dr. Mourad Abbas ( http://sites.google.com/site/mouradabbas9/corpora ) The corpus Khaleej-2004 contains 5690 documents. It is divided to 4 topics (categories). The corpus Watan-2004 contains 20291 documents organized in 6 topics (categories). Researchers who use these two corpora would mention the two main references: (1) For Watan-2004 corpus ---------------------- M. Abbas, K. Smaili, D. Berkani, (2011) Evaluation of Topic Identification Methods on... -
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CRP - Chemical Reaction Prediction
Predicting Organic Reactions using Neural Networks.
The intend is to solve the forward-reaction prediction problem, where the reactants are known and the interest is in generating the reaction products using Deep learning. This Graphical User Interface takes simplified molecular-input line-entry system (SMILES) as an input and generates the product SMILE & molecule. Beam search is used in Version 2, to generate top 5 predictions. Maximum input length for the model is 15 (excluding spaces). -
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IceNLP is an open source Natural Language Processing (NLP) toolkit for analyzing and processing Icelandic text. The toolkit is implemented in Java.
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popt4jlib
Parallel Optimization Library for Java
popt4jlib is an open-source parallel optimization library for the Java programming language supporting both shared memory and distributed message passing models. Implements a number of meta-heuristic algorithms for Non-Linear Programming, including Genetic Algorithms, Differential Evolution, Evolutionary Algorithms, Simulated Annealing, Particle Swarm Optimization, Firefly Algorithm, Monte-Carlo Search, Local Search algorithms, Gradient-Descent-based algorithms, as well as some well-known... -
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AI learning
AiLearning, data analysis plus machine learning practice
We actively respond to the Research Open Source Initiative (DOCX) . Open source today is not just open source, but datasets, models, tutorials, and experimental records. We are also exploring other categories of open source solutions and protocols. I hope you will understand this initiative, combine this initiative with your own interests, and do what you can. Everyone's tiny contributions, together, are the entire open source ecosystem. We are iBooker, a large open-source community,... -
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Semantic Assistants
Natural Language Processing (NLP) for the Masses
Semantic Assistants support users in content retrieval, analysis, and development, by offering context-sensitive NLP services directly integrated in standard desktop clients, like a word processor, and web information systems, like a wiki. -
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TEES
Turku Event Extraction System
Turku Event Extraction System (TEES) is a free and open source natural language processing system developed for the extraction of events and relations from biomedical text. It is written mostly in Python, and should work in generic Unix/Linux environments. Currently, the TEES source code repository still remains on GitHub at http://jbjorne.github.com/TEES/ where there is also a wiki with more information. -
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The project supports the Welsh Language Technology domain with a set of NLP tools that drive innovation and advance the development of sophisticated textual analysis solutions. The WNLT project delivers four core NLP modules; a) Word Segmentation for separating text into words b) Sentence Boundary Disambiguation for finding sentence boundaries c) Part of Speech Tagger for determining the part of speech of each word d) Morphological Analyser for identifying the root form (lemma) of words....
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BioC
We describe a simple XML format to share text documents and annotation
A minimalist approach to share text documents and data annotations. Allows a large number of different annotations to be represented. Project files contain: - simple code to hold/read/write data and perform sample processing. - BioC-formatted corpora - BioC tools that work with BioC corpora BioC goals - simplicity - interoperability - broad use - reuse There should be little investment required to learn to use a format or a software module to process that format. We are...
