Search Results for "data visualization, research"
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Showing 27 open source projects for "data visualization, research"
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Octave Forge
A collection of packages providing extra functionality for GNU Octave
...It provides capabilities for the numerical solution of linear and nonlinear problems, and for performing other numerical experiments. It also provides extensive graphics capabilities for data visualization and manipulation. Octave is normally used through its interactive command line interface, but it can also be used to write non-interactive programs. The Octave language is quite similar to Matlab so that most programs are easily portable. Refer to https://www.octave.org for more information. -
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ReViMS
ReViMS, a 3D volume rendering tool for light-sheet/confocal microscopy
Reconstruction and Visualization from Multiple Sections (ReViMS), an open-source, user-friendly software for automatically estimating volume and several other features of 3D multicellular aggregates (i.e., cancer spheroid, zebrafish, fruit fly). ReViMS requires a z-stack of 2D binary masks, obtained by segmenting a sequence of fluorescent images acquired by scanning the aggregate along the z axis, using a confocal or a light-sheet fluorescent microscope. It provides a number of tools... -
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The Sound Description Interchange Format (SDIF) is an established standard for the interchange of sound descriptions and analysis data. This project provides libraries, SDIF (in C) and Easdif (in C++), tools, and wrappers to read and write SDIF files.
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SOFA Toolbox
Spatially Oriented Format for Acoustics
This project provided the SOFA Toolbox, a toolbox for the spatially oriented format for acoustics (SOFA). The SOFA Toolbox is the successor of the SOFA API for Matlab/Octave. More information about SOFA can be found here: http://sofaconventions.org On July 2025, we have left SourceForge: The SOFA Toolbox 2.2.0 is the last release published here. All further releases can be found at the SONICOM Ecosystem: https://ecosystem.sonicom.eu/tools/ The code development happens on GitHub:... -
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slab3d
slab3d is a real-time virtual acoustic environment.
slab3d is a real-time virtual acoustic environment rendering system. It includes two rendering applications, libraries for spatial auditory display and audio signal processing development, and a set of tools for HRTF analysis and visualization. -
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ReViSP
ReViSP, a 3D volume rendering MATLAB tool for multicellular spheroids
Reconstruction and Visualization from a Single Projection (ReViSP) tool: a 3D volume rendering method we developed to reconstruct the 3D shape of multicellular spheroids, besides estimating the volume by counting the voxels (3D pixels) fully included in the 3D surface. ReViSP is written in MATLAB (The MathWorks, Inc., Massachusetts, USA) and the source code is freely provided. Requirements for running ReViSP from the source code: MATLAB 2020a and Image Processing Toolbox 11.1 or later... -
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OpenDAFF
Directional Audio File Format
OpenDAFF is a free, open-source software package for directional audio data - like the directivity of microphones, speakers, as well as head-related transfer functions (HRTFs) -
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PRMLT
Matlab code of machine learning algorithms in book PRML
This Matlab package implements machine learning algorithms described in the great textbook: Pattern Recognition and Machine Learning by C. Bishop (PRML). It is written purely in Matlab language. It is self-contained. There is no external dependency. This package requires Matlab R2016b or latter, since it utilizes a new Matlab syntax called Implicit expansion (a.k.a. broadcasting). It also requires Statistics Toolbox (for some simple random number generator) and Image Processing Toolbox (for... -
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OpenFace
A state-of-the-art facial behavior analysis toolkit
OpenFace is an advanced facial behavior analysis toolkit intended for computer vision and machine learning researchers, those in the affective computing community, and those who are simply interested in creating interactive applications based on facial behavior analysis. The OpenFace toolkit is capable of performing several complex facial analysis tasks, including facial landmark detection, eye-gaze estimation, head pose estimation and facial action unit recognition. OpenFace is able to... -
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Marine Mammal Acoustic DCL
Advanced acoustic detection, classification and localization
Advanced detection, classification and localization (DCL) of marine mammals and passive acoustic monitoring (PAM). Code is being developed as Matlab routines, interfaces for Ishmael (http://www.bioacoustics.us/ishmael.html), and in other formats. -
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CoRoPa stands for Computational Rough Paths. The aim of CoRoPa is to provide a software framework for various ideas related to Rough Path Theory, including rough differential equations and the digital description of serial data streams.
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TraceX
MatLab App for calculating fitting isotopic exchange profile data
MatLab App for calculating fitting isotopic exchange profile data. Developed for measuring self-diffusivity and effective surface exchange coefficient of ion conducting materials. Requires MatLab image processing toolbox If you use this tool for you research, please cite my PhD thesis: Cooper, S. J. Quantifying the Transport Properties of Solid Oxide Fuel Cell Electrodes. (Imperial College London, 2015). -
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MORPHE
MORphological PHenotype Extraction
MORphological PHenotype Extraction (MORPHE) is a suite of automated image processing, visualization, and classification algorithms to facilitate the analysis of heritable and clonal red-to-green transitions that occurred during the growth of a colony. -
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YASAV
SRAM Memory Aging Simulator for Image/Video Processing Systems
YASAV is a GUI-based tool for fast analysis and visualization of SRAM based memory aging. The customization is done for YUV videos to realize use cases for image/video processing applications. This tool accepts SRAM scratchpad memory configuration and user parameters (like test data sets, required aging years etc.) and provides aging estimates in terms of Static Noise Margin (the metric of SRAM aging estimation) and in-depth duty cycle analysis. -
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flow visualization toolbox
matlab 2D image processing GUI toolbox for flow visualization
A general flow visualization Matlab toolbox for image processing of some common planar/surface visualization techniques from PLIF (Planar laser induce fluorescence) for tracer distribution, BOS (background oriented Schlieren) for density, TSLC (Temperature sensitive liquid crystal) for thermal and PSP (Pressure sensitive paint) pressure distribution measurement. -
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MatrixUser
A Multi-functional GUI-based Program for Image Processing and Analysis
The MatrixUser project is moving to GitHub, the latest version can be obtained from https://leoliuf.github.io/MatrixUser/ Most of the medical images (e.g. CT, MRI, PET, etc.) comprises multiple frames which represent slices, phases, timing etc. from the same imaging object. Those images can be saved as multidimensional matrices in Matlab thanks to Matlab's powerful support of multidimensional data representation. However, within Matlab, most of image manipulation functions are limited or... -
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mVision library is a set of functions related with computer vision programmed in Matlab. Also include a couple of GUIs for test visually the functions.
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LAVA for AFM
Lloyd's Algorithm-based Volumetric Analysis for AFM Images
This MATLAB-based program enables analysis of AFM images. In particular, it allows the user to measure the volume of all distinguishable features in an image and to isolate and sort those particles. As the name implies, LAVA uses Lloyd's Algorithm, also known as k-means sorting, to identify a small set of volumes representative of the actual distribution of particle in the image. Although developed for determining feature volume, LAVA is also completely compatible with other types of... -
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Malimpa stands for MAtlab Library for IMage Processing and Analysis. It provides functions for 2D/3D grascale/color image creation, filtering, or measurement. It requires, and complements Matlab Image Processing Toolbox. Important notice: the project is now hosted in GitHub, https://github.com/dlegland/matImage
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DCTV
DUAL CONSTRAINED TV-BASED REGULARIZATION ON GRAPHS
Algorithms based on Total Variation (TV) minimization are prevalent in image processing. They play a key role in a variety of applications such as image denoising, compressive sensing and inverse problems in general. In this work, we extend the TV dual framework that includes Chambolle's and Gilboa-Osher's projection algorithms for TV minimization. We use a flexible graph data representation that allows us to generalize the constraint on the projection variable. We show how this new... -
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SmoothLife
A generalization of Conway's Game of Life
Conway's Game of Life is generalized to a continuous domain. OpenGL and GLSL shaders are used for real-time 2D and 3D graphics. Time stepping is done via a real to complex FFT based convolution operation. There are also two deliberately simple test implementations in FreeBasic and Matlab. A 2D version on a sphere shows that it is really not dependent on the underlying grid. -
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This is a MATLAB implementation of inverse compositional Active Appearance Models (AAMs), as described in the "Active Appearance Models Revisited" paper by Iain Matthews and Simon Baker.
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This application allows to generate graphics from data file in table format and a graphical configuration file XML..
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Overhead Imagery Research Data Set (OIRDS) - an annotated data library & tools to aid in the development of computer vision algorithms
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A library providing easy, flexible, and efficient read/write access to video files using a wide variety of codecs in MATLAB on Windows and GNU/Linux platforms, using DirectShow and ffmpeg backends, respectively. Also provided are 'load' and 'imread' for bulk reading.