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The MolTools Java library provides tools for building applications that handle nucleotide sequence data. Features include sequence I/O, handling of lists/databases of sequences, calculation of Tm, and other utilities for sequence design.
KimBlast GUI formats and indexes Fasta databases for Blast, performs Blast searches and analyzes results. Python 3.x version.
For more information, you can have a look at the README.md file in the source code tree:
https://sourceforge.net/p/lp-csic-uab/kimblast3/code/ci/default/tree/README.md
MOLGENIS can be used to generate databases for life science experiments (micrroarray, mass spectrometry, genomics) having a web user interface, csv exchange format, and programmatic interfaces (web services, rest, and r-project). See NatRevGen 8.
ProTag integrates biological web services and online databases seamlessly into the Microsoft Office applications Word, Excel and PowerPoint. It is extensible and offers smart tagging of biological objects (e.g. protein names) within Office documents.