Showing 3 open source projects for "link script"

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    Amplicon_Sequencing_Worfklow

    Amplicon_Sequencing_Worfklow

    Analyzing amplicon data from sequences to stats

    ...There are also instructions provided in case you are running these analyses via a computing cluster/Slurm workload manager. You can choose to go through the workflow using either an Rmd script, an html file, or a PDF, or via the homepage link provided. If you have questions or concerns, please don't hesitate to reach out. Thanks!
    Downloads: 0 This Week
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  • 2

    Autmated Peptide Screening

    Screening peptides for MHC and/or MHC-T cell receptor affinity

    Modified version of AutoGrow, autogrow.ucsd.edu/ , with a mutation script added in the class files, and a global change of the defined mutation point from Hydrogen atoms to Calphas, to allow placement of Amino Acids. Deposited are 3 versions, used for my PhD Thesis. These allow for mutation of short 2-15 amino acid peptides, and associated screening of these using AutoDock or AutoDock Vina, allowing for 8 CPU systems to screen 10K peptides a day or 1-2K with flexible residues added in. ...
    Downloads: 0 This Week
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  • 3

    RMol : SD/Molfile information in R

    RMol: Transforming SD/Molfile structure information into R Objects

    RMol is an R script with a collection of functions to link information of SD/Molfile structure databases with powerful graph analysis packages in R.
    Downloads: 0 This Week
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