Showing 141 open source projects for "mining software linux"

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  • 1
    Weasis

    Weasis

    Weasis is a web-based DICOM viewer for advanced medical imaging

    Weasis is a free, open-source DICOM viewer designed for advanced medical imaging, clinical diagnostics, and research. It operates as a standalone desktop application with web-based integration capabilities. The software supports medical image visualization across multiple modalities, including CT, MRI, ultrasound, and radiography. It integrates with Picture Archiving and Communication Systems (PACS) and healthcare information systems using standard DICOM protocols. Users can perform...
    Downloads: 4 This Week
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  • 2
    Doctor Dok

    Doctor Dok

    Doctor Dok is an AI based medical data framework

    Store, manage, and understand your medical history in one secure place that only you can access. Built to protect your privacy with full end-to-end encryption. Convert all your Blood Tests, MRI Scans, TK Scans, Visit reports, and Hospital Admission Reports to JSON, safely store in the cloud, and discuss, annotate, and translate them with AI. Doctor Dok is a secure storage, digitization, sharing, and AI discovery platform for all your family and/or folder health data. All health history -...
    Downloads: 0 This Week
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  • 3
    OpenMRS

    OpenMRS

    Open source Health IT for the planet

    OpenMRS is a community-developed, open source, enterprise electronic medical record system. Our mission is to improve health care delivery in resource-constrained environments by coordinating a global community to creates and support this software.
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    Downloads: 1,416 This Week
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  • 4
    C3D is a command-line tool for converting 3D images between common file formats. The tool also includes a growing list of commands for image manipulation, such as thresholding and resampling.
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    Downloads: 131 This Week
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  • 5
    Grassroots DICOM

    Grassroots DICOM

    Cross-platform DICOM implementation

    Grassroots DiCoM is a C++ library for DICOM medical files. It is accessible from Python, C#, Java and PHP. It supports RAW, JPEG, JPEG 2000, JPEG-LS, RLE and deflated transfer syntax. It comes with a super fast scanner implementation to quickly scan hundreds of DICOM files. It supports SCU network operations (C-ECHO, C-FIND, C-STORE, C-MOVE). PS 3.3 & 3.6 are distributed as XML files. It also provides PS 3.15 certificates and password based mecanism to anonymize and de-identify DICOM datasets.
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    Downloads: 157 This Week
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  • 6
    Biosignal Tools
    BioSig is a software library for processing of biomedical signals (EEG, ECG, etc.) with Matlab, Octave, C/C++ and Python. About 50 different data formats are supported.
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    Downloads: 152 This Week
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  • 7
    The Chemistry Development Kit
    The Chemistry Development Kit (CDK) is a scientific, LGPL-ed library for bio- and cheminformatics and computational chemistry written in Java. The main home page of the CDK is now at: http://cdk.github.io
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    Downloads: 52 This Week
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  • 8
    ODIN

    ODIN

    develop, simulate and run magnetic resonance sequences

    ODIN is a free software framework for rapid prototyping of magnetic resonance imaging (MRI) sequences. The sequences can be tested, simulated and executed on scanner hardware from different manufacturers.
    Downloads: 64 This Week
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  • 9
    CleverPsych  Practice Management

    CleverPsych Practice Management

    FREE software to manage your psychology or allied health solo practice

    CleverPsych is FREE software for psychologists and other allied health professionals who run their own practices. We have been using CleverPsych in our own practice in Australia since 2007. The system enables you to record your clients, appointments, services, organisations and referring doctors. The aim is to make operations like generating standard letters, claiming from the government and insurance companies, and reporting income, much easier. LOOK in the Files tab for...
    Downloads: 24 This Week
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  • 10
    MITK Workbench
    The MITK Workbench is a free, open-source application for medical image visualization, segmentation, registration, and much more. Beyond the Workbench application, MITK is a comprehensive C++ framework for medical image computing. It provides a modular foundation for extending the MITK Workbench with custom plugins or developing your own medical imaging applications and research prototypes.
    Downloads: 7 This Week
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  • 11
    SPINA

    SPINA

    Structure parameter inference approach for endocrine feedback control

    SPINA is software for the rapid, reliable and accurate determination of constant structure parameters of endocrine feedback control systems. It is a class of static function tests that require nothing more than steady-state concentrations of hormones or metabolites obtained in vivo. The first version of this cybernetic approach had been developed for the evaluation of the functional status of the thyroid gland, i.e. thyroid's secretory capacity (gain of thyroid, GT or SPINA-GT) and sum...
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    Downloads: 3 This Week
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  • 12
    illness index

    illness index

    illness_index A Computer Program of a Medical Textbook.

    A computer scientist has attempted to program a textbook of British general practice (primary care) medicine, that is, Hodgkin K (1978) "Towards Earlier Diagnosis....", 4th Edition, Churchill Livingstone. If a patient types presenting findings (such as headache, cough), the program prompts the user for expansion/denial of appropriate findings, in order to construct a list of patient findings. The program also calculates a list of likely diseases, which the user can use the web to find out...
    Downloads: 0 This Week
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  • 13
    DxTonia

    DxTonia

    A tool for detecting the presence of leg dystonia from videos.

    An open-source diagnostic tool for detecting the presence of leg dystonia from videos. The software provides an automated solution for detecting leg dystonia in children with cerebral palsy (CP), by using artificial intelligence. The software has been verified on two datasets and achieved higher accuracy than routine clinical care. Stay tuned for the improved version. Note: Currently only works on Windows PC with Nvidia GPU.
    Downloads: 3 This Week
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  • 14
    Huygens Remote Manager
    The Huygens Remote Manager is an open-source, efficient, multi-user web-based interface to the Huygens software by Scientific Volume Imaging (http://www.svi.nl/) for parallel batch deconvolutions.
    Downloads: 0 This Week
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  • 15

    GrowthRates

    Calculate growth rates from microplate reader output

    The Bellingham Research Institute (BRI) develops and distributes software that is free of charge to academic and other non-profit organizations. GrowthRates is our software tool that simplifies the analysis of microplate reader output from microbial growth experiments without having to program in Python, R, or MATLAB. It automates the calculation of growth rate parameters, including rates, lag times, maximum population density. Manual calculation of those parameters requires at least 5...
    Downloads: 6 This Week
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  • 16
    TRANSDICOM

    TRANSDICOM

    DICOM C-Find→C-Move→C-Store Free SoftWare

    This Program is a DICOM QR Tool. If you input a PatientID, you can find some Study. and you can send the other PACS. also you can get DICOM FIles(???.dcm).
    Downloads: 5 This Week
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  • 17
    MELAGE
    MELAGE is a neuroimaging software developed for visualizing and processing medical images, both Ultrasound and Magnetic Resonance Images (MRIs). Specially it has been prepared for neuroimaging of newborns, it is a versatile platform that allows the visualization of many types of medical images. It allows to load two, three and four-dimensional images of both techniques and in the case of 3D images it allows the simultaneous visualization of the three orthogonal planes which facilitates the...
    Downloads: 0 This Week
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  • 18
    InVesalius

    InVesalius

    3D medical imaging reconstruction software

    ...Reconstructed models can be exported in formats such as STL, OBJ, and PLY for further processing or 3D printing. Available for Windows, macOS, and Linux, InVesalius supports medical research, education, and anatomical visualization workflows.
    Downloads: 1 This Week
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  • 19
    OmicSelector

    OmicSelector

    Feature selection and deep learning modeling for omic biomarker study

    OmicSelector is an environment, Docker-based web application, and R package for biomarker signature selection (feature selection) from high-throughput experiments and others. It was initially developed for miRNA-seq (small RNA, smRNA-seq; hence the name was miRNAselector), RNA-seq and qPCR, but can be applied for every problem where numeric features should be selected to counteract overfitting of the models. Using our tool, you can choose features, like miRNAs, with the most significant...
    Downloads: 1 This Week
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  • 20

    OpenVigil

    Open pharmacovigilance data extraction, mining and analysis tool

    OpenVigil provides a webinterface to analyse pharmacovigilance data, i.e., spontanous or systematic collections of treatments (drugs) and observed adverse events ("drug side effects"). FDA Adverse Event Reporting System (AERS) and other pharmacovigilance data (e.g., Canadian or German) are supported. The OpenVigil web-based analysis tools offer several analysis modes like extraction, filtering, mining of data and analyses via measurements of disproportionality like proportional reporting...
    Downloads: 7 This Week
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  • 21

    plastimatch

    Volumetric image processing software

    Plastimatch is an open source software for image computation. Our main focus is high-performance volumetric registration of medical images, such as X-ray computed tomography (CT), magnetic resonance imaging (MRI), and positron emission tomography (PET).
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    Downloads: 71 This Week
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  • 22
    KARDIA ("heart" in Greek) is a Matlab software with a graphic user interface designed for the analysis of cardiac interbeat interval data.
    Downloads: 1 This Week
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  • 23
    Triangolo

    Triangolo

    Liothyronine dosage calculator

    Calculator software helping to determine L-T4 and L-T3 substitution dosage according to the algorithms provided by the European Thyroid Association (ETA).
    Downloads: 0 This Week
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  • 24
    LymPHOS2

    LymPHOS2

    LymPHOS2 Web-App

    LymPHOS2 is a web-based Application at www.LymPHOS.org containing peptidic and protein sequences and spectrometric information on the PhosphoProteome of human T-Lymphocytes. - Nguyen, TD., Vidal-Cortes, O., Gallardo, Ó., Abian, J., Carrascal, M., LymPHOS 2.0: an update of a phosphosite database of primary human T cells. Database 2015, 2015. DOI: 10.1093/database/bav115 - Carrascal, M., Ovelleiro, D., Casas, V., Gay, M., Abian, J., Phosphorylation analysis of primary human T lymphocytes...
    Downloads: 0 This Week
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  • 25
    HL7 Inspector

    HL7 Inspector

    HL7 Inspector is a tool for managing HL7 messages

    The HL7 Inspector project has moved to Bitbucket. https://bitbucket.org/crambow/hl7inspector All new releases can be found there. The web-based version can still be found at www.hl7inspector.com
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    Downloads: 15 This Week
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