Showing 25 open source projects for "data base tools"

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  • 1
    Biosignal Tools
    BioSig is a software library for processing of biomedical signals (EEG, ECG, etc.) with Matlab, Octave, C/C++ and Python. About 50 different data formats are supported.
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    Downloads: 262 This Week
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  • 2
    GNU Gluco Control (GGC) is diabetes management application. It helps managing user's daily data, food data. Has graphs, statistics, printing, diabetes devices support (meter, pump, CGMS). It works on any platform supporting at least Java 5 (1.5). Our repo moved to GIT (click on tab Git Code), Lowest supported Java now is 1.8 and project code base is in process of redesign (updating libraries and ways how application is built and run). IMPORTANT: Project was moved to GitHub: https...
    Downloads: 17 This Week
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  • 3

    OpenVigil

    Open pharmacovigilance data extraction, mining and analysis tool

    OpenVigil provides a webinterface to analyse pharmacovigilance data, i.e., spontanous or systematic collections of treatments (drugs) and observed adverse events ("drug side effects"). FDA Adverse Event Reporting System (AERS) and other pharmacovigilance data (e.g., Canadian or German) are supported. The OpenVigil web-based analysis tools offer several analysis modes like extraction, filtering, mining of data and analyses via measurements of disproportionality like proportional reporting ratio...
    Downloads: 3 This Week
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  • 4
    sRNAWorkbench

    sRNAWorkbench

    The UEA sRNA Workbench

    A suite of tools for analysing small RNA (sRNA) data from Next Generation Sequencing devices. Including expression profiling of known mirco RNA (miRNA), identification of novel miRNA in deep-sequencing data and identification of other interesting landmarks within high-throughput genetic data
    Downloads: 2 This Week
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  • 5

    ICDtools

    Tools for ICD (International Classification of Diseases) data

    Currently implemented: Python parser to import ICD10 XML data into a relational PostgreSQL database Sponsored by Ordium Biotechnology https://ordium.ai MIT License
    Downloads: 0 This Week
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  • 6
    LymPHOS2

    LymPHOS2

    LymPHOS2 Web-App

    ... using sequential IMAC and titanium oxide enrichment. J. Proteome Res. 2008, 7, 5167-5176. DOI: 10.1021/pr800500r - Ovelleiro, D., Carrascal, M., Casas, V., Abian, J., LymPHOS: design of a phosphosite database of primary human T cells. Proteomics 2009, 9, 3741–3751. DOI: 10.1002/pmic.200800701 - Gallardo, Ó., Ovelleiro, D., Gay, M., Carrascal, M., Abian, J., A collection of open source applications for mass spectrometry data mining. Proteomics 2014, 20, 2275-2279. DOI: 10.1002/pmic.20140012
    Downloads: 0 This Week
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  • 7
    SIVIC
    SIVIC is an open-source, standards-based software framework and application suite for processing and visualization of DICOM MR Spectroscopy data. Through the use of DICOM, SIVIC aims to facilitate the application of MRS in medical imaging studies.
    Downloads: 8 This Week
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  • 8
    DICOM Image Reader

    DICOM Image Reader

    A minimal Medical application to read and view DICOM (dcm) image file

    Dicom Image Reader is opensource medical image viewer built with JavaScript, HTML5, NodeJS and Electron framework. It can load data in DICOM format (single image dcm) and provides standard tools for its manipulation such as contrast, zoom, drag, possibility to draw regions on top of the image and imaging filters such as threshold and sharpening. It is based DWV JavaScript opensource library. =============== Requirements: - Processor: Intel Pentium 4 processor or later that's SSE2 capable...
    Downloads: 23 This Week
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  • 9
    Toolboxes for SPM (http://www.fil.ion.ucl.ac.uk/spm/) developed at Freiburg Brain Imaging (http://fbi.uniklinik-freiburg.de/)
    Downloads: 3 This Week
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  • 10
    XNBC: neurobiology simulation tool

    XNBC: neurobiology simulation tool

    XNBC is a graphic application to simulate biologic neural networks.

    XNBC is a full featured application for computer naive neuroscientists. It simulates biological neural networks using graphic tools to edit neurons and networks, to run the simulation and to analyze results. Written in C, it runs on Unix and Windows. Web site : http://ticemed-sa.upmc.fr/xnbc/ All recent versions are on this site.
    Downloads: 0 This Week
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  • 11
    Census2
    Census is a comprehensive cross-platform project manager and integration hub for NONMEM, the gold standard tool for model-based pharmacometric data analysis.
    Downloads: 0 This Week
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  • 12

    CoVEC

    Consensus Variant Effect Classification

    The package provides SVM models to be used with SVMlight (http://svmlight.joachims.org/) for drawing a consensus out of individual 3rd-party predictions about the effect of mutations. The 3rd party tools are SIFT, Polyphen2, SNPs&GO and Mutation Assessor. The package also provides a series of Perl modules and scripts to assist in the preparation of data. The modules can be used to build custom tools and pipelines, whereas the scripts provide basic executable implementations based...
    Downloads: 0 This Week
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  • 13
    Intelligent e-knowledge base engine for any kind of knowledge-based applications, supporting effective knowledge presentation, precise knowledge search, adaptive learning and immediate consulting.
    Downloads: 0 This Week
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  • 14
    GestURC

    GestURC

    Logiciel en ligne de gestion d'essais cliniques.

    ... comptes d'accès et du paramétrage du logiciel L'interêt de ce logiciel repose sur sa simplicité d'installation et d'utilisation. Idéal pour les structures avec peu de personnel. Le nom de l'application vient de Gestion d'Unite de Recherche Clinique. Développé en PHP, supporté par une base de données MySQL. Cette application web fonctionne sur n'importe quel navigateur récent. N'hésitez pas à me contacter pour plus d'informations. Eric
    Downloads: 1 This Week
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  • 15
    PROJECT MOVED: see http://www.vmtk.org for up-to-date information. Libraries and tools for 3D reconstruction, geometric analysis, mesh generation and surface data analysis in image-based blood vessel modeling.
    Downloads: 0 This Week
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  • 16
    The development and curation of a range of XML-based tools for using Chemical Markup Language (CML), including XSD XML Schemas for validation, datatyping and constraining CML documents and XSLT Stylesheets for transforming, filtering and rendering.
    Downloads: 1 This Week
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  • 17
    GNUexp
    GNUexp is a GNUstep/Cocoa framework and a collection of tools helping you to plan, develop, and administer applications associated with visual psychophysics, experimental psychology and statistical data analysis.
    Downloads: 0 This Week
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  • 18
    Open Screening Environment is a open source system for management of High Throughput Screening related experiments. The platform consists of new research tools that will enhance significantly management and analysis of HTS data. More information can be f
    Downloads: 0 This Week
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  • 19
    Tools for analysis of fMRI data (formerly know as the SPM Toolbox).
    Downloads: 0 This Week
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  • 20
    MATLAB tools to create overlay images from NIfTI or ANALYZE files (neuroimaging format) and convert them to DICOM for use in the clinical environment. Allows radiologists and neurosurgeons easy access to fMRI data. http://paradime.net/research/
    Downloads: 0 This Week
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  • 21
    EpiForms is a PHP/MySQL web-based application which provides data management and reporting tools, for epidemiology purpose especially .
    Downloads: 0 This Week
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  • 22
    Our goal is to create an open source framework and toolset for modeling dynamic cellular network functions, and to develop a user community committed to using, extending and exploiting these tools to further our knowledge of biologic processes.
    Downloads: 20 This Week
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  • 23
    Thea, Tools for High-throughput Experiment Analysis, is an integrated information processing system dedicated to the annotation of data issued from classification systems with biological information coming from a knowledge base.
    Downloads: 0 This Week
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  • 24
    The LabVIEW application toolkit for phasic heart rate analysis in psychophysiological research incorporates a variety of tools for offline extraction and analysis of heart rate data.
    Downloads: 0 This Week
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  • 25
    This application is used to track food calories and physical activity calories based on a data base of meals and exercises. The database can be personalized based on your lifestyle and habits.
    Downloads: 0 This Week
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