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1

The Chemistry Development Kit

The Chemistry Development Kit (CDK) is a scientific, LGPL-ed library for bio- and cheminformatics and computational chemistry written in Java. The main home page of the CDK is now at: http://cdk.github.io

Downloads: 30 This Week

Last Update: 2026-04-03
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2

noise-free-cnv

program for analyzing and manipulating DNA microarray data

...The visualization and the suppression of genomic waves, the comparison of two datasets by subtraction and the simultaneous inspection of LRR and BAF values are amongst the most frequent applications of this software. This program is able to read and write files suitable for PennCNV or raw files containing measured values of any kind.

Downloads: 4 This Week

Last Update: 2018-11-30
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3

Adaptative thresholding for fMRI

Matlab scripts to perform cluster FDR adaptative thresholding

Matlab plug-in for SPM allowing to obtain a threshold for cluster FDR - the method fits a Gamma-Gaussian mixture model to the SPM-T and finds the optimal threshold (crossing between noise and activation). Optionally write the thresholded maps.

Downloads: 1 This Week

Last Update: 2015-05-26
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4

MASyV

MASyV (Multi-Agent System Visualization) enables one to write agent-based models/cellular automata, eg. in C, visualize them in real time & capture to movie file with MASyVs GUI & message passing lib. Includes examples: Hello World, ants, viral infection

1 Review

Downloads: 0 This Week

Last Update: 2012-07-18
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Stop vibe-debugging.
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