Search Results for "java open source projects"
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187 projects for "java open source projects" with 2 filters applied:
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Train ML Models With SQL You Already KnowBuild and deploy ML models using familiar SQL. Automate data prep with built-in Gemini. Query 1 TB and store 10 GB free monthly.
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dcm4che is an implementation of DICOM and IHE actors in Java. Homepage: http://www.dcm4che.org, Google Group: http://groups.google.com/group/dcm4che?hl=en, Wiki: http://www.dcm4che.org/confluence, Issue Tracking: http://www.dcm4che.org/jira
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XMedCon
medical image conversion utility
a medical image conversion utility & library; hereby hoping to lower at least one barrier in medical research projects. -
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OpenMRS
Open source Health IT for the planet
OpenMRS is a community-developed, open source, enterprise electronic medical record system. Our mission is to improve health care delivery in resource-constrained environments by coordinating a global community to creates and support this software. -
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Grassroots DICOM
Cross-platform DICOM implementation
Grassroots DiCoM is a C++ library for DICOM medical files. It is accessible from Python, C#, Java and PHP. It supports RAW, JPEG, JPEG 2000, JPEG-LS, RLE and deflated transfer syntax. It comes with a super fast scanner implementation to quickly scan hundreds of DICOM files. It supports SCU network operations (C-ECHO, C-FIND, C-STORE, C-MOVE). PS 3.3 & 3.6 are distributed as XML files. It also provides PS 3.15 certificates and password based mecanism to anonymize and de-identify DICOM datasets. -
AI-powered service management for IT and enterprise teamsGive your IT, operations, and business teams the ability to deliver exceptional services—without the complexity. Maximize operational efficiency with refreshingly simple, AI-powered Freshservice.
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The Chemistry Development Kit (CDK) is a scientific, LGPL-ed library for bio- and cheminformatics and computational chemistry written in Java. The main home page of the CDK is now at: http://cdk.github.io
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Stanford Data Miner
Tools for integration and analysis of heterogeneous immunological data
An extensive description of this system is published in the Journal of Translational Medicine (http://www.translational-medicine.com/). In brief, the system consists of two main web applications, a data integration app and a data exploration app. The data integration app is a fully custom Java "Web 2.0" product called Sherpa. Sherpa uses Seam, a platform integrating Asynchronous JavaScript and XML (AJAX), JavaServer Faces (JSF), the Java Persistence API (JPA), and Enterprise Java Beans (EJB) 3.0. The data exploration app is an open source business intelligence product called JasperServer (version 3.7), customized through supported configuration changes. ... -
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GNU Gluco Control (GGC) is diabetes management application. It helps managing user's daily data, food data. Has graphs, statistics, printing, diabetes devices support (meter, pump, CGMS). It works on any platform supporting at least Java 5 (1.5). Our repo moved to GIT (click on tab Git Code), Lowest supported Java now is 1.8 and project code base is in process of redesign (updating libraries and ways how application is built and run). IMPORTANT: Project was moved to GitHub:...
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ExCon Imager
Gigapixel GPU accelerated radio interferometric imager
ExCon can create images with a very wide field of view (more than billion pixels). It implements novel gridding and image weighting algorithms. It is well suited to make ultra deep radio interferometric images, minimizing aliasing artefacts and PSF variation. NVIDIA GPU acceleration is available. JAVA/SCALA support available. -
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OpenVigil
Open pharmacovigilance data extraction, mining and analysis tool
OpenVigil provides a webinterface to analyse pharmacovigilance data, i.e., spontanous or systematic collections of treatments (drugs) and observed adverse events ("drug side effects"). FDA Adverse Event Reporting System (AERS) and other pharmacovigilance data (e.g., Canadian or German) are supported. The OpenVigil web-based analysis tools offer several analysis modes like extraction, filtering, mining of data and analyses via measurements of disproportionality like proportional reporting... -
MongoDB Atlas runs apps anywhereMongoDB Atlas gives you the freedom to build and run modern applications anywhere—across AWS, Azure, and Google Cloud. With global availability in over 115 regions, Atlas lets you deploy close to your users, meet compliance needs, and scale with confidence across any geography.
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iPath is providing an free and open plattform for "case based collaboration", especially designed for medical applications (telemedicine, etc). The iPath-Server package provides a sort of medical BBS to discuss/consult cases online. Additional modules
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OpenEmergency
"OpenEmergency - Open source helping you save lives!"
The goal of OpenEmergency is to provide software for organizations that typically are unable to afford commercial level software (i.e. volunteer organizations or small providers). keywords: ambulance, dispatch, EMS, 911, police, fire, emergency, ambulanc -
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As of 2018-06-28, this project has moved to https://github.com/AdamaJava. This copy of the code will remain but all new code updates and releases will be from the new site. Java code developed by the Australian ICGC team for operating on next-generation sequencing data. This code is currently being maintained and expanded by the QIMR Berghofer Genome Informatics team (http://www.qimrberghofer.edu.au/lab/genome-informatics/) More details and documentation can be found on the...
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QMinim
A web-based minimisation service
Based on MinimPy (http://sourceforge.net/projects/minimpy/), QMinim is a web-based minimization application, for allocation of subject to different arms of a clinical trial. It is an alternative to randomization, with the advantage of balancing arms of trial with respect to preselected prognostic factors. All aspects of minimization procedure including treatments, factors, minimization protocole, and including a preload can be customized using QMinim. -
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DicomReader is a simple Java Dicom files decipher. It handles headers and images within as well; data (headers and pixel-value images) will be saved into ascii clear text files. A pgm version of the image files is also provided.
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UMLS::Query is an umbrella for projects that create measures of semantic similarity for the biomedical domain. Our current project is UMLS-Interface and UMLS-Similarity. Our JBI-2007 article was based on Semantic-Similarity and Snomed-Interface.
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GDL Editor
Computerized guideline editor for clinical decision support
The GDL editor is multiplatform application that allows users to create, edit and run GDL files. GDL is a formal language designed to represent clinical knowledge for decision support. It is designed to be natural language- and reference terminology- agnostic by leveraging the designs of openEHR Reference Model and Archetype Model. The tool provides an editing and testing environment capable of generating forms based on the elements defined in the GDL. Requirements: Java Runtime... -
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Elexis Praxisprogramm
An Eclipse RCP program for all aspects of a (Swiss) medical practice
An Eclipse RCP program for all aspects of a medical practice: electronic medical record (EMR), laboratory findings etc., as well as accounting, billing (swiss TARMED-System, other systems to be developped) and other daily work. A fully functional version may be downloaded via http://download.elexis.info/3.1.0. Users may optionally include a demo database to have a playground for experiments. See also http://wiki.elexis.info/Installation_Elexis_3.0_OpenSource Elexis 3.1.0 was released... -
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CamBA is a Linux package for statistical analysis, by script/GUI, of neuroimaging data (fMRI/sMRI), developed at the Brain Mapping Unit, University of Cambridge. Non-parametric permutation-based statistics. Input images: 4D NiFTI files, output: HTML/
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Entrainer is a Java program (JRE 1.8.0_40+ required, available from http://java.sun.com/javase/downloads/index.jsp) which creates binaural beat frequencies with sound, light and animations for the purpose of entraining one's brain waves.
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Mauve computes and interactively visualizes genome sequence comparisons. Using FastA or GenBank sequence data, Mauve constructs multiple genome alignments that identify large-scale rearrangement, gene gain, gene loss, indels, and nucleotide substutit
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CanReg5 (moved to Github)
Canreg5 is a software package for population based cancer registries
Cancer registries need a tool to input, store, check and analyse their data. If these data are also coded and verified in a standard way, it facilitates the production of comparable analyses across registry populations. The main goal of the CanReg5 project is to provide a flexible and easy to use tool to accomplish these objectives. CanReg5 is a multi user, multi platform, open source tool to input, store, check and analyse cancer registry data. It has modules to do: data entry,... -
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Analyze My Genes
Compare gene analysis results from 23andme with the human genome
This program compares personal gene analysis results from 23andme with extracted databases from the human genome project. An typical example of an extracted database is a dataset which contains all alternative alleles which occur less than 1% of the time. -
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Eviewbox is a java imaging suite, its purpose is to view and spread native DICOM medical images and allowing for 2D reconstructions. EViewbox applet will allow to see the DICOM images on every platform.
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MyOscar is a personal health record system. This project contains both the data storage server as well as a client / patient UI for accessing the data. Other data access clients can be / have been written, the Oscar EMR is one such client. The sourceforge myoscar-users@lists.sourceforge.net is the main mail list and form of communications for this project. The sourceforge Tickets system is the bug and feature tracker for this project. The sourceforge git repository is not the...
