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This is a collection of different little tools written in MATLAB, JAVA, Python. They all have to to do with Imaging & Microscopy for life science research and related topics or problems. Some of them are meant to be used with ImageJ and MicroManager.
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cTAKES is a system for annotating clinical documents, built on the Apache UIMA framework .
cTAKES development has moved to apache.org.
Please see http:/ctakes.apache.org
It is a sofware to admin al things about a sportive club, from the trainig to the economy. The first step will take care of individual sports: athletics and cycling. Later we will support team sports like football, basket, handball or rugby.
OMedM (Open Medical Management) is a project that aims at providing a robust and scalable platform for medical information management, initially targeted at hospitals and large medical centres, with flexible access in mind.
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Journal Management Systems (JMS) is a journal management and publishing software system. Available as open source, JMS assists with every stage of the refereed publishing process, from submissions to online publication. JMS seeks to improve the scholarly
This project consists of modifications to the i2b2 core project management cell in order to increase the security of the authentication information passed to the client. These changes are being considered for the next core release.
SAAT Semi-Automated Annotation Tools
The Medical University Graz, in cooperation with the Fraunhofer Institute for Biomedical Engineering IBMT is developing the SAAT - Semi-Automated Annotation Tools in the CRIP context.
The OBO-Annotator is a semantic NLP tool that is designed to give its end-users a great deal of flexibility to combine any number of OBO ontologies from the OBO foundry regardless of their format and use them to annotate text-bases.
The Integrative Biology VRE is a web-based graphical user interface and repository that provides an environment where biological simulation experiments can be constructed without the need for any knowledge of unix, cluster computing, or shell scripting.