Showing 17 open source projects for "j-trace"

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  • 1
    segyio

    segyio

    Fast Python library for SEGY files

    Segyio is a small LGPL-licensed C library for easy interaction with SEG-Y and Seismic Unix formatted seismic data, with language bindings for Python and Matlab. Segyio is an attempt to create an easy-to-use, embeddable, community-oriented library for seismic applications. Features are added as they are needed; suggestions and contributions of all kinds are very welcome.
    Downloads: 1 This Week
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  • 2
    KoBra
    This is a standalone program for a) the calculation of diffusion coefficients of sorbates inside nanoporous materials at different loadings by using transition rate constants and for b) solving the master equation for a system consisted of a large number of unit cells per each direction. It is based on the following published paper "Kolokathis, P. D., Braun, O. M.. J. Comput. Chem. 2019, 40, 2053– 2066. DOI: 10.1002/jcc.25857"
    Downloads: 0 This Week
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  • 3
    CorThiZon

    CorThiZon

    Cortical Thickness of brain by Zones

    ...If you use this toolbox, please reference: ‘Early diagnostic of Alzheimer’s disease using cortical thickness: impact of cognitive reserve', Querbes O, Aubry F, Pariente J, Lotterie JA, Démonet JF, Duret V, Puel M, Berry I, Fort JC, Celsis P, Alzheimer’s Disease Neuroimaging Initiative, Brain, 2009 Aug, 132(Pt 8):2036-47 A footnote giving the link to: http://sourceforge.net/projects/corthizon/ will be appreciated.
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  • 4
    Clustering by Shared Subspaces

    Clustering by Shared Subspaces

    Grouping Points by Shared Subspaces for Effective Subspace Clustering

    These functions implement a subspace clustering algorithm, proposed by Ye Zhu, Kai Ming Ting, and Mark J. Carman: "Grouping Points by Shared Subspaces for Effective Subspace Clustering", Published in Pattern Recognition Journal at https://doi.org/10.1016/j.patcog.2018.05.027
    Downloads: 0 This Week
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  • 5
    Invariant curve calculations in Matlab

    Invariant curve calculations in Matlab

    Calculating stable & unstable curves for 2 dimensional maps in matlab.

    This is an implementation that follows closely the algorithm for calculating stable curves, described by J. P. England, B. Krauskopf, H. M. Osinga in the paper "Computing One-Dimensional Stable Manifolds and Stable Sets of Planar Maps without the Inverse" published in SIAM J. APPLIED DYNAMICAL SYSTEMS 3.2 (2004), 161-190. The package also contains an implementation for calculating the unstable curves which is based on the paper "Growing 1D and Quasi-2D Unstable Manifolds of Maps" by Bernd Krauskopf and Hinke Osinga published in Journal of Computational Physics (Oct 1998), Volume 146, 404-419. ...
    Downloads: 0 This Week
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  • 6

    AnalyzeNNLS

    MRI Multiple Echo T2 Analysis

    ...Please reference: Bjarnason TA, Mitchell JR. JMR 206:200-4 (2010). Temporal Phase Correction included in version 2.5. If you use this functionality, please reference: Bjarnason TA, Laule C, Bluman J, Kozlowski P. JMR 232:22-31 (2013).
    Downloads: 0 This Week
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  • 7
    SimilarityViewer

    SimilarityViewer

    Identify co-occuring genes in cyanobacteria

    ...For graphics export the SimilarityViewer uses the outstanding “export_fig” toolbox version 1.99 (https://mathworks.com/matlabcentral/fileexchange/23629-export-fig) courtesy of Oliver Woodford and Yair Altman. [Copyright (c) 2014, Oliver J. Woodford, Yair M. Altman. All rights reserved.]
    Downloads: 4 This Week
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  • 8
    TraceX

    TraceX

    MatLab App for calculating fitting isotopic exchange profile data

    ...Developed for measuring self-diffusivity and effective surface exchange coefficient of ion conducting materials. Requires MatLab image processing toolbox If you use this tool for you research, please cite my PhD thesis: Cooper, S. J. Quantifying the Transport Properties of Solid Oxide Fuel Cell Electrodes. (Imperial College London, 2015). @phdthesis{SJCooper2015, author = {Cooper, S. J.}, number = {November}, publisher = {Imperial College London}, school = {Imperial College London}, title = {{Quantifying the Transport Properties of Solid Oxide Fuel Cell Electrodes}}, year = {2015} }
    Downloads: 1 This Week
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  • 9
    This project houses software to analyze data acquired from electrophysiology experiments. Currently, we have an Octave/MATLAB program to analyze electroneurogram traces of coupled oscillators, and a Perl library for the analysis of voltage trace data
    Downloads: 0 This Week
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  • 10
    Density-ratio based clustering

    Density-ratio based clustering

    Discovering clusters with varying densities

    ...An existing density-based clustering algorithm, which is applied to the rescaled dataset, can find all clusters with varying densities that would otherwise impossible had the same algorithm been applied to the unscaled dataset. Reference: Zhu, Y., Ting, K. M., & Carman, M. J. (2016). Density-ratio based clustering for discovering clusters with varying densities. Pattern Recognition. http://www.sciencedirect.com/science/article/pii/S0031320316301571
    Downloads: 1 This Week
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  • 11
    This site contains four packages of Mass and mass-based density estimation. 1. The first package is about the basic mass estimation (including one-dimensional mass estimation and Half-Space Tree based multi-dimensional mass estimation). This packages contains the necessary codes to run on MATLAB. 2. The second package includes source and object files of DEMass-DBSCAN to be used with the WEKA system. 3. The third package DEMassBayes includes the source and object files of a Bayesian...
    Downloads: 0 This Week
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  • 12

    YASAV

    SRAM Memory Aging Simulator for Image/Video Processing Systems

    ...It can also be used as a standalone tool for visualizing YUV 4:2:0p video files. In case of usage, please refer to our DAC'15 paper: M. Shafique, M. U. K. Khan, Orcun Tuefek and J. Henkel, "EnAAM: Energy-Efficient Anti-Aging for On-Chip Video Memories", in Design Automation Conference (DAC), San Francisco, CA, 2015.
    Downloads: 0 This Week
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  • 13
    ArchNURBS

    ArchNURBS

    NURBS-based elastic and limit analysis of masonry arches in MATLAB

    ...A comprehensive descritpion of ArchNURBS is given in "ArchNURBS: NURBS-Based Tool for the Structural Safety Assessment of Masonry Arches in MATLAB", A. Chiozzi, M. Malagu', A. Tralli and A.Cazzani, J. Comput. Civil Eng., 2015. (http://ascelibrary.org/doi/abs/10.1061/%28ASCE%29CP.1943-5487.0000481) ArchNURBS has been developed thanks to a collaboration between the University of Ferrara (Italy) and the University of Cagliar
    Downloads: 4 This Week
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  • 14
    TASC NASA

    TASC NASA

    Tool for Analysis of Surface Cracks (TASC)

    ...With the geometry and material parameters entered, TASC interpolates to the appropriate J(φ) vs. crack mouth opening displacement (CMOD) and far-field tension stress, σ, vs. CMOD solution, providing the full solution as CMOD ranges from zero out to the CMOD limit of the solution space for the given input parameters.
    Downloads: 1 This Week
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  • 15
    Functional Mechanism

    Functional Mechanism

    Regression Analysis under Differential Privacy

    ...The main idea is to enforce epsilon-differential privacy by perturbing the objective function of the optimization problem, rather than its results. Please cite the following paper if you choose to use this code: J. Zhang, Z. Zhang, X. Xiao, Y. Yang, and M. Winslett. Functional Mechanism: Regression Analysis under Differential Privacy. PVLDB 5(11):1364-1375, 2012.
    Downloads: 0 This Week
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  • 16
    Source code for the paper J. Keiner and B. Waterhouse. Fast Principal Components Analysis method for finance problems with unequal time steps. In P. L'Ecuyer and A. B. Owen, editors, Monte Carlo and Quasi-Monte Carlo Methods 2008, Springer Verlag, 2010
    Downloads: 0 This Week
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  • 17
    Matlab freeware for data analysis, by J. M. Lilly
    Downloads: 0 This Week
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