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Showing 20 open source projects for "download file http"
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FieldTrip
The MATLAB toolbox for MEG, EEG and iEEG analysis
FieldTrip is the MATLAB software toolbox for MEG, EEG and iEEG analysis, which is released free of charge as open source software under the GNU general public license. FieldTrip is developed by members and collaborators of the Donders Institute for Brain, Cognition, and Behaviour at Radboud University, Nijmegen, the Netherlands. The toolbox offers advanced analysis methods of MEG, EEG, and invasive electrophysiological data, such as time-frequency analysis, source reconstruction using... -
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Artifact3-D
Artifact3-D: 3D Analysis and Documentation of Archaeological Artifacts
...Please cite: Grosman L, et al. (2022) Artifact3-D: New software for accurate, objective and efficient 3D analysis and documentation of archaeological artifacts. PLoS ONE 17(6): e0268401. https://doi.org/10.1371/journal.pone.0268401 To install, download "Artifact3-D Installation.zip" available in the Files tab, or click Download (green button) in the Summary tab. Please see the README file for installation instructions. The open source MATLAB code is available at the following link (https://drive.google.com/drive/folders/17RMndfkIGmS_aIdW8rc9vxDO4gBuduvt?usp=sharing). -
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CometAnalyser
CometAnalyser, for quantitative comet assay analysis.
...CometAnalyser is an open-source deep-learning tool designed for the analysis of both fluorescent and silver-stained wide-field microscopy images. Once the comets are segmented and classified, several intensity/morphological features are automatically exported as a spreadsheet file. Video Tutorial: CometAnalyser is written in MATLAB. It works with Windows, Macintosh, and UNIX-based systems. Please, download the sample datasets and test it watching the video tutorial to understand how it works: https://www.youtube.com/watch?v=vh2VFnMw50A Contacts: filippo.piccinini85@gmail.com beleonattila@gmail.com -
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chethermo
Software for Introductory Chemical Engineering Thermodynamics
...The text is distinctive in making the molecular perspectives accessible at the introductory level and connecting properties with practical applications. This site distributes the software for the textbook. If you are a 'user', then you want to download the archive from 'Download' icon or the 'Files' link. If you want the latest version of a particular file, then use the 'Code' link and look in the 'trunk' folder for the main development and 'branches' for any side projects. Please note that the 'Files' releases are periodic, and that the 'Code' files may contain development files or code that is different from the 'Files' content. -
Build Securely on Azure with Proven FrameworksMoving to the cloud brings new challenges. How can you manage a larger attack surface while ensuring great network performance? Turn to Fortinet’s Tested Reference Architectures, blueprints for designing and securing cloud environments built by cybersecurity experts. Learn more and explore use cases in this white paper.
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iTides
an internal tide generation GUI (in Matlab)
With the support of the NSF and ONR over the past few years we have developed a MATLAB tool that calculates the internal wave field generated by barotropic tidal flow of a nonlinearly stratified fluid past any arbitrary two-dimensional topography of finite extent You can download a recent version as a .zip file or get up-to-date version via the svn version (svn checkout svn://svn.code.sf.net/p/itides/svn/trunk itides-svn). -
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EigenMS is a normalization method implemented in R (and older version in Matlab) available as a set of two functions that should be used in a sequence. Please download EigenMS.zip file (latest version). Latest version uploaded in October 2017 has a bugfix for single treatment group normalization. Rescaling has been omitted from 2015. EigenMS utilizes SVD to detect bias trends in the data and eliminates them. EigenMS eliminates effects from known and unknown factors and can be utilized for any -omic platform. ...
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SimilarityViewer
Identify co-occuring genes in cyanobacteria
The SimilarityViewer allows the identification of genes co-occurring in subsets of 77 cyanobacterial organisms. The software is available as a MATLAB script and as stand-alone applications for Mac, Linux, and Windows computers. To install this program download the zip file appropriate for your system, unzip it, and follow the instructions in the README file. SimilarityViewer and the included data are licensed under the Apache License Version 2.0. If you use the SimilarityViewer for scientific purposes please cite the according paper. For graphics export the SimilarityViewer uses the outstanding “export_fig” toolbox version 1.99 (https://mathworks.com/matlabcentral/fileexchange/23629-export-fig) courtesy of Oliver Woodford and Yair Altman. ... -
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PB-sQF_BacterialTyping
Bacterial Typing from either assembled or raw short reads file
Probability Binning - signature Quadratic Form, PB-sQF, types unknown sequence to one of the 628 bacterial library genomes which gives the smallest test statistics thus most similar library strain. The input file is the k-mer counts of the unknown assembled genome sequence or raw short reads file in decimal format generated by KAnalyze developed by P. Audano et al. (https://sourceforge.net/projects/kanalyze/). The download included the library index, the library name and sample unknowns. -
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MS2Browser
LC-MS/MS data browser designed for siderophore analysis
MS2Browser is a tool for interactive pre-processing, analysis and visualization of LC-MS/MS data. Input is an mzXML file with centroided LC-MS/MS data. The program is written in MatLab and it was designed for the analysis of siderophores (iron transporting small molecules) in bacterial media. Some of the functionality and use of MS2Browser is described as part as an open-access book chapter: http://www.intechopen.com/books/applications-from-engineering-with-matlab-concepts/small-molecule-lc-ms-ms-fragmentation-data-analysis-and-application-to-siderophore-identification A siderophore structural database assembled for this project can be found alongside the MS2Browser software (.cfw format to be used with ChemBioFinder(TM) ). ... -
MongoDB Atlas runs apps anywhereMongoDB Atlas gives you the freedom to build and run modern applications anywhere—across AWS, Azure, and Google Cloud. With global availability in over 115 regions, Atlas lets you deploy close to your users, meet compliance needs, and scale with confidence across any geography.
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RAFTS3
Rapid Alignment Free Tool for Sequences Similarity Search
...RAFTS3 performed searches many times faster than those with BLASTp against large protein databases such as NR and Pfam, with a small loss of sensitivity depending on the similarity degree of the sequences. RAFTS3 is a new alternative for fast comparison of protein sequences, genome annotation and biological data mining. Preprint: http://dx.doi.org/10.1101/055269 Precomputed databases evaluated on paper are available for download at http://www.bioinfo.ufpr.br/software/rafts3 -
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MatlabSimulink2CPP
Demo of Simulink to C++ C or HDL FGA for HFT potential
Video and files download for Visual trading idea to C++ or FPGA HFT Meetup File download sample: test model (Matlab 2014b with Visual Studio 2013 C++ project generated) Powerpoint MATLAB SIMULINK http://quantlabs.net/blog/2015/04/video-and-files-download-for-visual-trading-idea-to-c-or-fpga-hft-meetup/ -
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Toolboxes for SPM (http://www.fil.ion.ucl.ac.uk/spm/) developed at Freiburg Brain Imaging (http://fbi.uniklinik-freiburg.de/)
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A community repository to develop Commodity Grid (CoG) Software for the access of Grids, through high level interfaces. The main repository is maintained at http://www.cogkit.org
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RFlex
Spectroradiometer control for shipborne reflectance measurements
...Enjoy! Two Rflex units collected over 30,000 validated Rrs spectra on the Baltic Sea this year! See http://www.ferryscope.org for dissemination of these results in the coming years. ------ Licence: http://creativecommons.org/licenses/by-nc-sa/3.0/ -
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CS Miner
A tool for Navigating in Chemical Space
CS-Miner stands for Chemical Space Miner and is a software tool for navigating in chemical space of compound databases. It helps for deriving appropriate classification models and performing virtual screening. Download it via: http://csminer.com/csm/?p=7 A quick tutorial is available through: http://csminer.com/csm/?p=8 -
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Fish4Knowledge Project
Analysis of undersea fish videos
The Fish4knowledge project investigated: information abstraction and storage methods for analyzing undersea video data (from 10E+15 pixels to 10E+12 units of information), machine and human vocabularies for detecting & describing fish, flexible process architectures to process the data and scientific queries and effective specialised user query interfaces. A combination of computer vision, database storage, workflow and human computer interaction methods were used to achieve this. The... -
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nwhess2freq
Calculates frequencies/modes from an nwchem generated hessian
...The script is finished in its current form in the sense that it is feature complete. Feel free to amend, translate, copy, steal etc. See the README in the code repository for instructions. Installation: Simply download the file and start Octave in the download directory. -
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GPUmat
GPUmat is a C/C++ GPU engine for Matlab based on NVIDIA CUDA.
...But you can compile the source code if you want. Instructions to compile the source code: You need to download a SVN client and then from command line: svn export http://svn.code.sf.net/p/gpumat/code/trunk ./GPUmat the above command creates a folder ./GPUmat with the source code. Then go to the 'doc' folder, open the GPUmat_Developer_Guide.pdf and check the chapter "Source code compilation" -
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Matlab coder to C++ or C
MATLAB Coder converting Hello World M script to C or C++
Open Source Code Demo of MATLAB Coder converting Hello World M script to C++ file This is a simple demo of this powerful to demo the conversion of Matlab's M script file to a C++ file for your trading or target platform. Youtube video and Download the ZIP package from http://quantlabs.net/blog/2012/11/rading-or-hft-open-source-code-demo-of-matlab-coder-toolbox-converting-hello-world-m-script-to-c-file-free-opensource/ -
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The collection of MATLAB compatible routines for Mechanical Trading Systems. Released ta-lib - MATLAB MEX API to www.ta-lib.org . Related projects: http://sourceforge.net/projects/wlmllink and http://sourceforge.net/projects/algotrade.
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