Showing 10 open source projects for "data mapping"

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  • 1
    CBIG

    CBIG

    Computational Brain Imaging Group tools

    ...Brain parcellation tools (e.g., Yeo networks, Schaefer parcellations) for cortical mapping.
    Downloads: 0 This Week
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  • 2
    Euler Pole Calculator (EPC)

    Euler Pole Calculator (EPC)

    A Matlab software to estimate Euler pole parameters

    The EPC software calculates velocities for any points located on the earth’s surface given the Euler pole parameters and estimates the Euler pole parameters given the observed velocities of a set of sites located on a tectonic plate. Since version 2, the software is able to estimate or apply the Plate Translation Rates, as well. Please cite one of the following papers when you use the software: - Goudarzi, M A, Cocard, M, and Santerre, R. 2014."EPC: Matlab Software to Estimate Euler...
    Downloads: 4 This Week
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  • 3
    Orbit Determination Toolbox (ODTBX)

    Orbit Determination Toolbox (ODTBX)

    Advanced mission simulation and analysis tool

    The Orbit Determination Toolbox (ODTBX) is developed by the Navigation & Mission Design branch at NASA Goddard Space Flight Center as an advanced mission simulation and analysis tool used for concept exploration, proposal, early design phase, and/or rapid design center environments. ODTBX functions and utilities are combined in a flexible architecture that allows for modular development of navigation algorithms and simulations. The core ODTBX functionality is realized through a set of...
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    Downloads: 4 This Week
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  • 4
    NTU RGB-D

    NTU RGB-D

    Info and sample codes for "NTU RGB+D Action Recognition Dataset"

    The “NTU RGB+D” repository provides access to a large-scale dataset for human action recognition (and its extension, NTU RGB+D 120). The dataset includes multiple modalities (RGB video, depth sequences, infrared video, 3D skeletal joint data) captured with multiple Kinect v2 cameras simultaneously. The repository also contains MATLAB / Python demo scripts for loading, visualizing, and processing skeleton data, mapping between modalities, and handling dataset structure. Multi-modal action recognition dataset, RGB, depth, infrared, skeletal data. Split into background / evaluation sets for one-shot evaluation (in the extended dataset).
    Downloads: 2 This Week
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  • 5
    Phenalysis

    Phenalysis

    Analyze agronomic plant research plots in aerial orthomosaic images.

    A graphical user interface to import, analyze and export plots from orthomosaic images of agronomic trials. Please cite the following reference in your work if you use Phenalysis: Khan Z and Miklavcic SJ (2019) An Automatic Field Plot Extraction Method From Aerial Orthomosaic Images. Front. Plant Sci. 10:683. doi: https://doi.org/10.3389/fpls.2019.00683 This tool is being developed through the sponsorship of the Australian Research Council's Industrial Transformation Research Hub on...
    Downloads: 0 This Week
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  • 6
    easy-dhpsf

    easy-dhpsf

    GUI for fitting 3D single-molecule images using the double-helix PSF

    This package of MATLAB routines with accompanying GUI allows scientific users to measure the 3D location of single molecules when using the double-helix point spread function (DH-PSF) widefield microscope. Version 2 also includes code that facilitates combining localization data from two spectral channels using a locally-weighted quadratic 3D registration function Features - Double-Gaussian estimator is calibrated via an axial scan of bright immobile fluorescent emitters (e.g. beads) - DH localization is performed through template matching and subsequent double Gaussian fitting - Tiff stacks of SM images are analyzed using template matching followed by double-Gaussian fitting to extract estimates of the molecule positions - Two spectral channels are registered by generating a locally-weighted quadratic mapping function from control point pairs
    Downloads: 1 This Week
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  • 7

    BioRec:Bird Census field data annotation

    Recognizing biological data from a notebook.

    This project helps to digitize field data for a certain Bird Census method. Namely, bird census based on personal inspection or small (~10 km^2) regions with recording birds' position and behaviour on paper. This project makes it easy to annotate such field data and to make this data available for statistical analysis.
    Downloads: 0 This Week
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  • 8
    Ymap - Yeast Mapping Analysis Pipeline

    Ymap - Yeast Mapping Analysis Pipeline

    Pipeline for large-scale genome changes analysis of genome datasets.

    The active use repository has migrated over to: https://github.com/darrenabbey/ymap The repository here was errantly created with some large binary files included. Attempts to extract the files from the history here have failed. A copy of the history was successfully scrubbed and then hosted at github. -------- Eukaryotic pathogens have complicated and dynamic genomes. To facilitate analysis of copy number variations (CNV), single nucleotide polymorphisms (SNPs), and loss of...
    Downloads: 0 This Week
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  • 9
    STI analysis and forecasting

    STI analysis and forecasting

    Analysis of drug resistance and epidemiology of STI (STD) in Russia

    The STIanafor is a tool for spatio-temporal data vizualization, analysis and forecast of incidence of sexually-transmitted diseases and drug resistance of pathogens in the Russian Federation. Currently supports gonorrhoea (N. gonorrhoeae) and syphilis (T. pallidum). A set of real data for testing is provided.
    Downloads: 0 This Week
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  • 10
    MATLAB GUI and code to map cell distribution around smooth spherical microcarriers beads from laser scanning confocal microscope images
    Downloads: 0 This Week
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