Search Results for "statistical shape modelling"
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Showing 2 open source projects for "statistical shape modelling"
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BiomeNet
BAYESIAN INFERENCE OF METABOLIC DIVERGENCE AMONG MICROBIAL COMMUNITIES
Metagenomics yields enormous numbers of microbial sequences that can be assigned a metabolic function. Using such data to infer community-level metabolic divergence is hindered by the lack of a suitable statistical framework. Here, we describe a novel hierarchical Bayesian model, called BiomeNet (Bayesian inference of metabolic networks), for inferring differential prevalence of metabolic networks among microbial communities. To infer the structure of community-level metabolic interactions, BiomeNet applies a mixed-membership modelling framework to enzyme abundance information. ... -
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phcfM
R package for modelling anthropogenic deforestation
...The two functions use embedded Gibbs samplers written in C++ with the Scythe statistical library to reduce computational time.
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