Open Source Python Mathematics Software - Page 6

A simple user interface to the R software environment. It is designed for people new to R and provides the user with easy access to their variables and data along with pointers to the most basic commands. It also allows for multiple people to share data across different sessions on different machines. In this way it also offers a collaborative environment for people to work together in remote locations.

CutePy is a lightweight Qt-based Python 3 console with variable explorer, command history, syntax highlighting and customizable startup script. Originally it was developed for simple scientific calculations as a replacement for e.g. Windows calculator or Python IDLE. Therefore its main aim is to start fast and provide more comfortable dealing with variables based on the Python language. However in the end it is a regular Python console and therefore can be used for almost any task.

This project contains the source code associated with the PLoS Computational Biology publication: "Differential Expression Analysis for Pathways". The paper text can be found here: http://www.ploscompbiol.org/article/info%3Adoi%2F10.1371%2Fjournal.pcbi.1002967

DEBay: Deconvolution of Ensemble through Bayes-approach DEBay estimates cell type-specific gene expression by deconvolution of quantitative PCR data of a mixed population. It will be useful in experiments where the segregation of different cell types in a sample is arduous, but the proportion of different cell types in the sample can be measured. DEBay uses the population distribution data and the qPCR data to calculate the relative expression of the target gene in different cell types in the sample. The user manual of DEBay: https://sourceforge.net/projects/debay/files/UserManual.pdf Sample data: https://sourceforge.net/projects/debay/files/Test_data/ Citation Information: Vimalathithan Devaraj, Biplab Bose. DEBay: A computational tool for deconvolution of quantitative PCR data for estimation of cell type-specific gene expression in a mixed population. Heliyon, 2020, 6(7), e04489. https://doi.org/10.1016/j.heliyon.2020.e04489

A Calculator for Geometry purposes, has commons functions.

A Python package that provides classes and tools for dealing with dimensional quantities. Includes a parser for the quantity language (i.e. calculates "3 meters per second in miles per hour") and a class for constructing matrices containing dimensions.

Accompanying software for the paper "Optimal Decision Rules for the Discursive Dilemma", by A. Alabert, M. Farré and R. Montes (https://arxiv.org/abs/2210.13100). Computes a ranking of the best decision rules according to a quantitative criterion based on the minimisation of the combined probabilities of false positives and false negatives

DragonFire is a compilation of various mathamatical formulas and theorms from algebra (and soon, Calculus). It shows users the formula for them to learn/use, or lets them enter data for DragonFire to compute.

A Python library bringing together utilities I've written over the years for work in bioinformatics and biostatistics, which should be generally applicable outside these fields as well. Focuses on string processing, DBI, and math.

Ellipt2d is a finite element program for solving second order, real and complex, two-dimensional elliptic problems with user-defined operators. Because Ellipt2d is written in Python, the code can easily be adapted for specific problems.

This App solves a system of simultaneous equations (liner or nonlinear) by using a matrix root solver. Iterations and solutions are provided by GSL (GNU science library).

Etchimaths(A'LEVEL) is a Mathematics software, a helping tool for Mathematics simulation(solving) and study for the GCE ADVANCED LEVEL standard.It is a solving machine as well as a teaching machine

ExoPlanet provides a graphical interface for the construction, evaluation and application of a Machine Learning model in predictive analysis. With the back-end built using the numpy and scikit-learn libraries, as a toolkit, ExoPlanet couples fast and well tested algorithms, a UI designed over the Qt4 framework, and graphs rendered using Matplotlib to provide the user with a rich interface, rapid analytics and interactive visuals. ExoPlanet is designed to have a minimal learning curve, allowing researchers to focus on the applicative aspect of Machine Learning rather than their implementation details. It provides algorithms for unsupervised and supervised learning, which may be done with continuous or discrete labels. Post analysis, the toolkit further automates building the visual representations for the trained model.

Famms is a Python module for applying the method of manufactured solutions (MMS) to PDE simulators written in C/C++, Fortran, and Python.

The Felo rating system provides an objective fencing strength estimate for each individual fencer in a group, just like the Elo rating in chess. This program calculates the Felo numbers by analysing a bout result list created by the user.

An object-oriented partial differential equation (PDE) solver, written in Python, based on a standard finite volume approach and includes interface tracking algorithms. *WARNING* The project is no longer using Sourceforge to maintain its repository.

Tim Peters' FixedPoint.py + Write docs for the Library Reference manual. I expect the existing module docstring will be a good start. + Create a test driver for Python's regression suite. + Have fun modernizing it, if you like (for example,

We have moved! Please go to https://launchpad.net/fr0st

**we moved to github** https://github.com/gimli-org/gimli Geophysical Inversion and Modeling Library

A user-friendly GTK+ GUI for SymPy

This project hosts tools used for analysis of Gaussian Mixture Distributions (GMDs) which are used for statistical signal processing. The tools are libraries for implementing GMD operations and programs used to analyze properties of GMDs.

A small simulator for Mendelian genetics, genetic drift, natural selection and random mutations, built on matplotlib and wxpython. A graph will be generated that traces the distribution of genotypes at successive generations.

Geomatrix, collection of C/C++ libraries to be used for symbolic description of n-dimensional geometric models. Operates internally with a representation that constructs complex objects based on primitives, allowing loss-less modifcation of models.

This project examines techniques to model three-dimensional rigid body motion using the geometric algebra of Dual Quaternions and how such models compare to more traditional models when used in underconstrained filtering applications.