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    OR-Tools - Google Optimization Tools

    OR-Tools - Google Optimization Tools

    Google's software suite for combinatorial optimization

    ...Once you model your problem in your preferred programming language, you can then use any of OR-Tools’ available solvers. OR-Tools is an award-winning project, having won three gold medals in the 2020 MiniZinc Challenge, the international constraint programming competition.
    Downloads: 8 This Week
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    MCPerm: Monte Carlo SNP permutation

    Monte Carlo permutation method for SNP multiple test correlation

    MCPerm: A Monte Carlo permutation method for multiple test correlation in case-control association study Traditional permutation (TradPerm) test is an important non-parametric analysis method which can be treated as the gold standard for multiple testing corrections in case-control association study. However, it relies on the original single nucleotide polymorphism (SNP) genotypes and phenotypes data to perform a large number of random shuffles, and thus it is computationally intensive, especially for genome-wide association study (GWAS). To improve the calculation speed without changing the size of the TradPerm p-value, we developed a Monte Carlo permutation (MCPerm) method as an efficient alternative to TradPerm. ...
    Downloads: 0 This Week
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