Open Source Linux Mathematics Software - Page 92

libGo is a C++ class library containing all kinds of things that proved useful to me. Included are: - Linear algebra, using LAPACK and CBLAS - V4L(1) image grabber - Multithreading - Image containers (up to 3D) - Some simple optimisation code - Python embedding helper - Matlab interface - .. and other things, have a look at the HTML documentation! golib grew over many years, things I had use for have been added now and then. Some parts are better taken care of than others. If you find anything spectacularly wrong or badly documented, and need assistance, please drop me a line.

gorbital is a atomic orbital viewer written using gtkmm (gtk--). gorbital displays a 3d interactive view of a electron orbitals. It is meant to be an open source viewer much like Orbital Viewer by David Manthey (http://www.orbitals.com/orb/).

gptoolbox is a comprehensive MATLAB toolbox for geometry processing, optimization, and image processing. It provides a wide range of utility functions for working with triangle and tetrahedral meshes, making it useful for tasks in computer graphics, computational geometry, and 3D modeling. The toolbox includes wrappers for external software such as TetGen, Triangle, QSlim, and meshfix, as well as functions for mesh smoothing, cleanup, deformation, and parameterization. It also implements discrete differential geometry operators, geodesic distance computations, and constructive solid geometry operations. Beyond geometry, gptoolbox includes features for quadratic programming, image colorization, and dithering. Most of the functions are pure MATLAB code, requiring only that the toolbox be added to the MATLAB path, while some specialized features depend on external libraries and compiled mex files.

A set of small utilities realizing theoretical graph algorithms (including tree algorithms). The utilities work with simple text input/output formats.

A collection of libraries usable in graphics applications. Includes mathlib, a math library (90% matrix/vector math) providing very high speed calculations for small matrices using a natural syntax.

A small utility for visualizing graphics of the wide math function list. Based on Glade/GTK+ toolkit so integrates into GNOME flawlessly. Uses mathGl library for drawing purposes, see http://mathgl.sourceforge.net/

Interactive Perl environment for data analysis. It consists of several integrated tools such as a Plotting tool, Interactive Shell, and more. Written entirely in Perl using Tk.

small drawing toy for your kids. the drawing is based on a simple coordinate system where lines can be drawn with different color, line width, etc. It is written using Ultimate++ framework.

GridPACK is a community-developed open-source collection of code for use in power systems research, analysis, and operation.

GRPN is a graphical reverse polish notation (RPN) calculator. GRPN is written in C and uses the GIMP Toolkit (GTK) for the GUI.

* GSA-SNP2 is a successor of GSA-SNP (Nam et al. 2010, NAR web server issue). GSA-SNP2 accepts human GWAS summary data (rs numbers, p-values) or gene-wise p-values and outputs pathway genesets ‘enriched’ with genes associated with the given phenotype. It also provides both local and global protein interaction networks in the associated pathways. * Article: SYoon, HCTNguyen, YJYoo, JKim, BBaik, SKim, JKim, SKim, DNam, "Efficient pathway enrichment and network analysis of GWAS summary data using GSA-SNP2", Nucleic Acids Research, Vol. 46(10), e60(2018). * PubMed ID: 29562348 * DOI: 10.1093/nar/gky175 -> PLEASE MOVE OR MAKE A COPY OF 'DATA' FOLDER INTO YOUR INTENSIVE TEST FOLDER (I.E. LINUX, MAC OR WINDOWS SPECIFIED FOLDER) TO ALLOW THE PROGRAM TO FIND THE PREDESIGNED DATA. * UPDATE NOTE: -> Sep-1-2020: add an update for Ubuntu-20.04. You will need Boost library installed (sudo apt-get install libboost-all-dev) -> Mar-7-2018: revise header terms in the output file

Este es una interface de alto nivel sobre gsl ( GNU Scientific Library ) escrita totalmente en Ansi C++

Python binding for GNU Scientific Library using Cython for NumPy users.

A project that allows to view random variables cdf/pdf, generate random numbers... gstatistics uses shared libraries to allow users to add new statistical laws definitions.

Draw & analysis math function graph in a free way!

hSDM is an R package for hierarchical species distribution models. Such models allows interpreting the observations (occurrence and abundance of a species) as a result of several hierarchical processes including ecological processes (habitat suitability, spatial dependence and anthropogenic disturbance) and observation processes (species detectability). Hierarchical species distribution models are essential for accurately characterizing the environmental response of species, predicting their probability of occurrence, and assessing uncertainty in the model results.

THIS PROJECT HAS MOVED

Scripts and supplementary data for the manuscript 'Hierarchical Bond Graph Modelling of Biochemical Networks': Peter J. Gawthrop(1), Joseph Cursons(1,2), and Edmund J. Crampin(1-4). (1) Systems Biology Laboratory, Melbourne School of Engineering, University of Melbourne, Victoria 3010, Australia. (2) ARC Centre of Excellence in Convergent Bio-Nano Science, Melbourne School of Engineering, University of Melbourne, Victoria 3010, Australia. (3) Department of Mathematics and Statistics, University of Melbourne, Victoria 3010, Australia. (4) School of Medicine, University of Melbourne, Victoria 3010, Australia Draft paper available at http://arxiv.org/abs/1503.01814

Two-Neighbours (based on the work of B. Hemkemeier) and Hermitian Neighbours (based on the work of A. Schiemann) rewritten in modern C++. Based on a geometrical method used by Witt and Kneser, HN++ (contains TN and HN) classifies genera of lattices. Building upon those ideas and the older celebrated programs TN and HN, HN++ contains various methods to analyse invariants of the constructed lattices as well as more randomized algorithms to quickly search through large genera.

This project collect several data mining methods, such as: 1) clustering methods; 2) biclustering methods; 3) FCA methods and etc.

hybopt is a set of libraries to solve the identification and optimal control problems for hybrid (mechanistic/empirical) dynamic (ODE and DAE) models.

hyperGK is a collection of C++ classes for parallelized numerical integration on several variables. The integrations are performed using Gauss-Kronrod quadrature. hyperGK is inspired and, to some extent, based on Quadpack, but generalized to multiple integrals on either rectangular regions or more general regions. This package is still under development. Usage examples can be found in the demonstration subdirectory.

iVSwap is a simple function which can be used as a library and swaps values between two variables in a mathematical way using a classic Boolean algebra law without the need of a buffer! The advantages of this technique is speed and portability.

ida-nirved is a C++ library to extend to facilitate native usage of Mathematics within C++.

Another simpler implementation for float only uses integer types, we should use -msoft-float first or we get complex result, so we need this with huge or tiny exponents float.