Showing 2663 open source projects for "gnu/linux"

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  • 1

    runjags

    The 'runjags' R package and standalone JAGS extension module

    This package provides high-level interface utilities for MCMC models via Just Another Gibbs Sampler (JAGS), facilitating the use of parallel (or distributed) processors for multiple chains, automated control of convergence and sample length diagnostics, and evaluation of the performance of a model using drop-k validation or against simulated data. Template model specifications can be generated using a standard lme4-style formula interface to assist users less familiar with the BUGS syntax. A...
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  • 2
    hyperGK

    hyperGK

    Gauss-Kronrod quadrature on several variables.

    hyperGK is a collection of C++ classes for parallelized numerical integration on several variables. The integrations are performed using Gauss-Kronrod quadrature. hyperGK is inspired and, to some extent, based on Quadpack, but generalized to multiple integrals on either rectangular regions or more general regions. This package is still under development. Usage examples can be found in the demonstration subdirectory.
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  • 3
    Command line calculator and tool for manipulating files and arrays of integer and floating point values.
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  • 4
    Education Ellie

    Education Ellie

    Learning software for children and autistic

    What is? Students with learning difficulties or mental disabilities have knowledge level and teaching methods similar to students in the first cycle of basic education. This software aims to help in the learning of these pupils and students of primary. Why Ellie? Ellie name comes from the software mascot is an owl (symbol of knowledge) red, interacting with people and help using software. Authors and Contributors Originally the software was developed by Pedro Luzio @pedroluzio,...
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  • 5

    PhaseSpace

    Analyse dynamical systems, plot its phase space and critical points.

    Phase Space is born out of the need of a simple yet powerful open source tool to study dynamical systems. PhaseSpace allows you to plot the phase space of the dynamical system you are studying, its critical points and the curves of slope zero and infinite.It can also plot the solutions of the system and it's vector field. To use PhaseSpace you'll need to have Python installed along with Matplotlib and Numpy.
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  • 6
    Opt4J

    Opt4J

    Modular Java framework for meta-heuristic optimization

    Opt4J is an open source Java-based framework for evolutionary computation. It contains a set of (multi-objective) optimization algorithms such as evolutionary algorithms (including SPEA2 and NSGA2), differential evolution, particle swarm optimization, and simulated annealing. The benchmarks that are included comprise ZDT, DTLZ, WFG, and the knapsack problem. The goal of Opt4J is to simplify the evolutionary optimization of user-defined problems as well as the implementation of arbitrary...
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  • 7
    Virtual Math Teams
    The Virtual Math Teams (VMT) Project (vmt.mathforum.org) at the Math Forum enables K-12 math collaborative learning, professional development of educators, & group cognition research. VMT is now integrated with GeoGebra (http://www.geogebra.org/).
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  • 8
    DubCen Calculator

    DubCen Calculator

    DUBCEN IS A FREE & OPEN SOURCE BROWSER BASED CALCULATOR AND CONVERTER

    Over the years, performing even basic calculations has become a tedious task. The old offline calculators have now a really obsolete user User Interface and most of the online resources are full of ads. DubCen is built to plug all these gaps. Our logo represents what we do. 2*C simply means 2*100 (C=100 in roman numerals). Hope you understand it now! Our logo represents the calculators and converters that DubCen has. DubCen name comes from Double+Century. We aim to offer 200 high...
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  • 9
    UNLocBoX

    UNLocBoX

    UNLocBox (Matlab convex optimization toolbox)

    The UNLocboX is a matlab convex optimization toolbox part of the UnlocX project. It is composed of the most used algorithms such as forward backward, Douglas-Rachford, admm or ppxa. Moreover a collection of proximal operators is available in order to implement problems very efficiently.
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  • 10
    Flamethyst is a flame fractal renderer written in java. It generalizes the classical algorithm in several ways, and support most features of Apophysis .flame files.
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  • 11
    An implementation of the Joint Generation Algorithm of Fredman and Khachiyan for the computation of a dual pair of monotone boolean formulas in DNF (hypergraph transversals, extreme rays of polyhedral cones...). User-replaceable oracle.
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  • 12

    Belief Reviser

    Belief Revision via PS-Merge under constraints belief merging operator

    Belief revision is a central topic in knowledge representation and reasoning. It consists in incorporating a new belief, changing as few as possible of the original beliefs while preserving consistency. Revision always considers new evidence as a better belief. Such new evidence is usually represented in the form of a propositional formula which must be preserved after the revision. Here, the Δps (PS-Merge) belief merging operator is extended in order to consider constraints, and ...
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  • 13

    FaRe

    Mathematica package for tensor reduction of Feynman integrals.

    Version 1.2 is now available! This version is compatible with FeynCalc 9.0 FaRe is a Mathematica package for tensor reduction of Feynman integrals. The integral can be any-rank and any-order. Dimensional reduction is used and the final output is regrouped according to tensor structures. FaRe requires FeynCalc to work. Please refer to http://arxiv.org/abs/1507.03527 for a detailed manual. If you use FaRe in a scientific publication or talk, please give proper academic credit by citing...
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  • 14

    Corbata

    CORe microBiome Analysis Tools

    Corbata is a set of statistical tools that can be used to analyze the core microbiome across a set of samples.
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  • 15

    minepy

    Maximal Information-based Nonparametric Exploration

    The minepy homepage has moved to http://minepy.readthedocs.io. The download page is now at https://github.com/minepy/minepy/releases.
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  • 16
    riboshape

    riboshape

    Predicting ribosome footprint profile shapes from transcript sequences

    Riboshape is a suite of algorithms to predict ribosome footprint profile shapes from transcript sequences. It applies kernel smoothing to codon sequences to build predictive features, and uses these features to builds a sparse regression model to predict the ribosome footprint profile shapes. Reference: Liu, T.-Y. and Song, Y.S. Prediction of ribosome footprint profile shapes from transcript sequences. Proceedings of ISMB 2016, Bioinformatics, Vol. 32 No. 12 (2016) i183-i191.
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  • 17

    jarta

    A Java library to model and fit ARTA processes.

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  • 18
    Nuklei is a C++ library that implements kernel functions and kernel density estimation for SE(3) data. Nuklei also provides tools for manipulating SE(3) transformations, and for manipulating point clouds.
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  • 19

    3D Grapher

    Easy-to-use software for plotting functions of two variables.

    3D Grapher is a software for plotting functions of two variables. It is a simple, easy to use, GPU accelerated, tool for making various surface plots. Additional requirements: JDK / JRE 8 OpenGL 2+
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  • 20
    ngs-flow
    Flow Solver Package with different applications (laminar flows, heat driven flows) in 3D and 2D for Netgen/NGSolve
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  • 21

    Econball

    Equation of stock trading simplified to game of moving resizing balls

    The econ theory is the value of buy and sell are usually equal, at whatever free market price at the time, so if we trade between 2 things, holding the total of those 2 equal eachother, then you can buy without anyone selling, or sell without anyone buying. Just change from one equal valued type to the other, and the total of all the A's and all the B's are scaled instantly to be the same amounts. Those who change to the majority side lose, and those who change to the minority side win,...
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  • 22

    Primes

    Calculate primes by using extremely fast sorting

    This project considers the problem of calculating primes as a sorting problem. It includes the most efficient tree-based sorting algorithm that is possible and shows that finding a new prime can be done by sorting the differences between the previous primes in the right way. Unfortunately it has turned out that going this way is even more slowly than trying to find primes by brute force. So it can only be used as a test with heavy load for the sorting algorithm, which can be used for...
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  • 23
    wxEcMath

    wxEcMath

    Easy mathematics in wxWidgets

    Tiny library written in C++/wxWidgets designed to manage mathematical objects : parser of expressions, plots, matrixes and complex numbers. Ansi and Unicode are supported. Documentation and rich samples are provided. Compiles with MSVC, BCC, GCC and Clang. Now on Git.
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  • 24
    Antiprism - Polyhedron Modelling
    TO DOWNLOAD ANTIPRISM GO TO: http://www.antiprism.com/download Antiprism is a set of programs for generating, manipulating, transforming and visualising polyhedra.
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  • 25
    CPPLapack is a c++ class wrapper for BLAS, LAPACK and PARDISO. Its special features are the followings. [1]User-friendly interface [2]Hi-speed matrix calculations using BLAS and LAPACK [3]Minimized number of copy times using Smart Temporary system
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