Search Results for "npdb-p"
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Showing 59 open source projects for "npdb-p"
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broom
Convert statistical analysis objects from R into tidy format
broom is part of the tidymodels ecosystem that converts statistical model outputs (e.g. from lm, glm, t.test, lme4, etc.) into tidy tibbles — standardized data frames — using functions tidy(), glance(), and augment(). These are easier to manipulate, visualize, and report programmatically. -
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UnBBayes
Framework & GUI for Bayes Nets and other probabilistic models.
...It supports Bayesian networks, influence diagrams, MSBN, OOBN, HBN, MEBN/PR-OWL, PRM, structure, parameter and incremental learning. Please, visit our wiki (https://sourceforge.net/p/unbbayes/wiki/Home/) for more information. Check out the license section (https://sourceforge.net/p/unbbayes/wiki/License/) for our licensing policy. -
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zkcm
A C++ library for multiprecision complex-number matrix calculations.
zkcm library is a C++ library for multi-precision complex-number matrix calculations. It provides a number of functionalities including the LU decomposition, the singular value decomposition, tensor product calculation, tracing-out operations, etc. -
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Clifford Multivector Toolbox
A toolbox for computing with Clifford algebras in MATLAB
...The toolbox is designed to work in the same way as MATLAB's own functions by overloading standard MATLAB functions with Clifford multivector versions. The toolbox can compute with any Clifford algebra with signature (p,q,r) but only with one algebra at a time. From version 2 of the toolbox onwards, computation is also supported with conformal geometric algebras (CGA), based on an underlying Clifford algebra to provide the numerical computation. The additional functionality does not impact on the original Clifford algebra functions of the toolbox. ... -
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Book-Reviews-In-Mathematica
Partial Differential Equations, Complex Analysis, Mathematica, Farlow
Cliff* Notes, Mathematica Evaluatable "Partial Differential Equations for Scientists and Engineers", Farlow "Physics for Scientists and Engineers", Serway "A First Course in Complex Analysis", Beck "PDE", Asmar "PDE, An Introduction", Colton "Elementary Differential Equations", 7th, Rainville "Ordinary Differential Equations", Tenenbaum "Linear Algebra And It's Applications", Lay "Swokowski Calculus", 5th, Swokowski "Chemistry Concepts & Problems, A Self-Teaching Guide", Houk "Openstax Chemistry" "College Algebra and Trigonometry", 2nd, Kaufman * 2nd order cannonicalization SOLVER, cannonical form automatically * nth order PDE to System of n first order PDE matrices generator with ODE Decouple Solving (pde not yet) * radial probability plot for Hydrogen, pde shrodinger's * Planck blackbody, Rutherford essay * fermi free electron essay * Table of Nucleon positions for all Isotope w/Manipulate * p-p separation nucleus plot using the above -
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CSI-Math-Notation-PostfixInfix
Perl Lib Math Notation
... - Context validation can be implemented in item selection routines or data context validation, when it is possible to identify data to be selected or ignored in some data analysis process. * NOTE: - Before any implementation, we recommend details in WIKI (https://sourceforge.net/p/csi-math-notation-postfixinfix/wiki/) or the CPAN Perl Modules, see: https://metacpan.org/pod/Math::Notation::PostfixInfix * Support: The Support Service is FREE. Do you need support? Open a ticket and I will get back to you as soon as possible. * Professional Services: Do you need any FREE professional services to use? ... -
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Geometric Theorem Proving
decide simple geometric statements
parse geometric statements in a human-readable language from command line arguments or stdin and decide their truth by use of Gröbner bases -
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OpenCL(tm) Solar System Simulation
An OpenCL Solar System simulation
OpenCL is a trademark of Apple Inc., and is used under license by Khronos Uses OpenCL to accelerate the integration of a large number of solar system bodies. Video at http://youtu.be/xp2Qyar3krI Rogue Star simulation http://www.youtube.com/watch?v=2dJEhPYfJ5U Discussion at http://forum.beyond3d.com/showthread.php?p=1766406 -
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gsasnp2
PubMed ID: 29562348 / DOI: 10.1093/nar/gky175
* GSA-SNP2 is a successor of GSA-SNP (Nam et al. 2010, NAR web server issue). GSA-SNP2 accepts human GWAS summary data (rs numbers, p-values) or gene-wise p-values and outputs pathway genesets ‘enriched’ with genes associated with the given phenotype. It also provides both local and global protein interaction networks in the associated pathways. * Article: SYoon, HCTNguyen, YJYoo, JKim, BBaik, SKim, JKim, SKim, DNam, "Efficient pathway enrichment and network analysis of GWAS summary data using GSA-SNP2", Nucleic Acids Research, Vol. 46(10), e60(2018)... -
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Rainflow
Fast rainflow counting written in C (C99)
..."Standard Practices for Cycle Counting in Fatigue Analysis", West Conshohocken, PA: ASTM International, 2011. [2] [https://community.plm.automation.siemens.com/t5/Testing-Knowledge-Base/Rainflow-Counting/ta-p/383093] -
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PlanetPack
Radial-velocity & transits analysis tool for exoplanets
...The description of the main theoretic concepts, statistical methods and algorithms that PlanetPack implements, is given in the following refereed papers: R.V. Baluev 2013, Astronomy & Computing, V. 2, P. 18 (initial release); R.V. Baluev 2018, Astronomy & Computing, V. 25, P. 221 (update 3.0). The technical manual explaining the details of the practical use is available in the download archive here (see the /doc/ subfolder). -
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KMWin
Kaplan-Meier for Windows
KMWin (Kaplan-Meier for Windows) is a convenient tool for graphical presentation of results from Kaplan-Meier survival time analysis. The programme is based on the statistical software environment R and provides an easy to use graphical interface. As an introduction, see http://dx.plos.org/10.1371/journal.pone.0038960#s2. -
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MandelbrotExplorer
A program to calculate and represent the Mandelbrot set
This project is a C++ program to calculate and represent graphically the Mandelbrot fractal set, and/or the corresponding Julia sets, according to the seed Z0 given by the user as input. The user disposes of a graphical interface to control the program and modify conveniently some parameters, like the XY-scales, the XY map area, the Julia seed for the complex series iteration of Z(n+1)=Z(n)^2+a, being Z(0)=(X0,Y0) the seed, and "a in XY" the points to be calculated. The user can... -
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BioFVM
3-D diffusion solver for biological problems
...It can solve for the diffusion of tens or hundreds of substrates on large 3-D domains. For simplicity, the code has minimal external dependencies. BioFVM was first published in: A. Ghaffarizadeh, S.H. Friedman, and P. Macklin. BioFVM: an efficient, parallelized diffusive transport solver for 3-D biological simulations. Bioinformatics 32(8): 1156-8, 2016. DOI: 10.1093/bioinformatics/btv730 method paper: http://dx.doi.org/10.1093/bioinformatics/btv730 -
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PMM-Lab
Predictive Microbial Modeling plug-in for KNIME
...PMM-Lab has been initiated and provided by the Federal Institute for Risk Assessment - BfR (Berlin, Germany). The software is in Beta status. Before using the software you have to read and accept the license and disclaimer (https://sourceforge.net/p/pmmlab/wiki/Disclaimer/). If you do not agree, do not use this software. -
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yacas
Computer calculations made easy
...It uses its own programming language designed for symbolic as well as arbitrary-precision numerical computations. The system comes with a library of scripts and extensive documentation. Yagy (http://sourceforge.net/p/yagy) provides full yacas experience wrapped in a simple and intuitive graphical interface. -
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GDLOG
Implementation of the GNFS for discrete logarithm problem in GF(p)
GDLOG is an implementation of the General Number Field Sieve algorithm for discrete logarithm problem in GF(p). -
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SEPIA: Security-oriented PN Framework
Petri net framework for security related modeling and reasoning.
...To support information flow analysis of processes, SEPIA defines so-called IF-Nets, tailored for security-oriented workflow modeling which enable users to assign security-levels (HIGH, LOW) to transitions, data elements and persons/agents participating in the process execution. SEPIA builds upon TOVAL (http://sourceforge.net/p/toval), JAGAL (http://sourceforge.net/p/jagal) and SEWOL (https://sourceforge.net/projects/jawl/). To use SEPIA, make sure these libraries are on the build path. SEPIA encloses the Multi Schema Validator (https://msv.java.net/) and isorelax (http://iso-relax.sourceforge.net/) The documentation can be found under http://doku.telematik.uni-freiburg.de/sepia. -
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WOLFGANG
Editor for Petri nets
Wolfgang is a lightweight tool that allows users to easily create and edit Petri nets and check them against general and workflow specific net properties. Specifically, Wolfgang supports full PNML conform editing functionality of Place-Transition Nets (P/T-Nets) and Colored Petri Nets (CPN) as they are defined in the SEPIA package. Its simple and easy to use interface allows to quickly create Petri nets from scratch, edit them graphically in many ways, store and even export them as PDFs. Use Wolfgang to smoothly create the Petri net you want! A user guide and a documentation can be found under http://doku.telematik.uni-freiburg.de/wolfgang. -
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JAGAL: Java Graph Library
Java graph library
JAGAL provides implementations for directed graphs (weighted and unweighted) and varoius types of transition systems as well as utils for graph traversal and modification. JAGAL builds upon the Java library TOVAL (located at http://sourceforge.net/p/toval). To use JAGAL, make sure the TOVAL library is on the build path. This library uses and encloses jGraphX (https://github.com/jgraph/jgraphx). A documentation for JAGAL can be found under http://doku.telematik.uni-freiburg.de/jagal. -
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pure python polyfit
python2/3: compute polyfit (1D, 2D, N-D) without thirdparty libraries
...also can be used for least squares solution computation and for A=QR matrix decomposition. Tested with python 2.7 and 3.4 Consider donating to this project: https://sourceforge.net/p/purepythonpolyfit/donation For a Sample use, refer to the WIKI -
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PanelCheck is an easy-to-use software tool for visualization of sensory profiling data using different types of plots. The joint information from the implemented plots provide detailed insight into assessor and panel performance.
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CPPQUADPACK
C++ port of QUADPACK with general function defination style.
...A C++ port of QUADPACK with a general function defination style to provide more flexible function parameter defination. Based on crbond C version QUADPACK(http://www.crbond.com/scientific.htm) . You can get the latest code by : git clone git://git.code.sf.net/p/cppquadpack/code cppquadpack-code -
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EMsieve
A simple sieve/prefactor program for Eisenstein-Mersenne Primes
A simple sieve/prefactor program for the so-called Eisenstein-Mersenne Primes: 3^p +- 3^((p + 1)/2) + 1. See http://oeis.org/A125738, A125739 and [1] for a good introduction. Some easily established properties are: p must be prime; sign is minus for p=+-1 (mod 12), plus otherwise; composites only have factors of form 6kp+1 (integer k). Related probable primes (3^p -+ 3^((p + 1)/2) + 1)/7 are sieved at the same time. -
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CUDAPm1
CUDA implementation of P-1 factoring for Mersenne numbers
CUDAPm1 is a modification of CUDALucas that implements the P-1 factoring algorithm for Mersenne numbers using the Fast Fourier Transform implemented by nVidia's cuFFT library. You need a CUDA-capable nVidia card with compute compatibility >= 1.3.