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software for identifying modules in networks (e.g. "community detection"), as described in "a bayesian approach to network modularity" (physical review letters 100, 258701 (2008); http://link.aps.org/abstract/PRL/v100/e258701).
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IFS Tools is a set of Java applets for the interactive, graphical construction of iterated function system (IFS) fractals. Output is in the form of IFS code and graphics.
This is a hybrid Matlab-Mathematica package for the numerical/pointwise and symbolic/explicit (as a piecewise polynomial) calculation of the B-Spline supported on a given 2D domain.
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This is an opensource project for the calculation of the mathematical constant Pi. If you are a mathematician or programer please contribute ideas or code for this project. Non professionals are also welcome to contribute.
Bayesian Surprise Matlab toolkit is a basic toolkit for computing Bayesian surprise values given a large set of input samples. It is also useful as way of exploring surprise theory. For more information see also: http://ilab.usc.edu/
Knotwork is a graphical application to create knotworks in a celtic, arabic or viking style. User draws a graph defined by vertices and edges, which gives the basis for building the knotwork. Web page: http://knotwork.sourceforge.net/index.html
R2HTML is a package for R, which includes HTML function and methods to output R objects to HTML. Allow for redirection on the fly. A driver for Sweave allows to parse HTML flat files containing R code and to automatically write the corresponding outputs.
BuddyScout is an interface between BuDDy (Binary Decision Diagram library) and GHC (Glasgow Haskell Compiler). It enables you to use the BDD library from within Haskell programs.
This Java project intends to implement a set of functions allowing a user to manipulate classical propositional logic statements and reason about their properties and connections.
UDA stands for Universal Descriptive Algebra. It consists of a Java package handling universal algebras and relational structures as description systems.
bioCity is a continuous space, discrete time simulation written in C++. It is meant to be of use to population biologists. Rules of behaviour are given to individuals that move, live, die, and procreate.
ChemCpp is a C++ toolbox for chemoinformatics focusing on the computation of kernel functions between chemical compounds. Together with Support Vector Machines, these kernel functions find natural applications for virtual screening of molecules.