Showing 59 open source projects for "binary analysis tool"

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  • 1
    TOPS_CeMM

    TOPS_CeMM

    User Friendly Data Analysis Tool for Interaction Data

    TOPS provides the benchtop scientist with a free toolset to analyze, filter and visualize data from functional genomic gene-gene and gene-drug interaction screens with a flexible interface to accommodate various different technologies and analysis algorithms in addition to those already provided here.
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  • 2

    GENIE (GEne-geNe IntEraction)

    GPU based Parallel Gene-Gene Interaction Analysis

    ...Most of the latest Central Processing Units (CPUs) have multiple cores, whereas Graphics Processing Units (GPUs) also have hundreds of cores and have been recently used to implement faster scientific software. However, currently there are no genetic analysis software packages that allow users to fully utilize the computing power of these multi-core devices for genetic interaction analysis for binary traits. Here we present a novel software package GENIE, which utilizes the power of multiple GPU or CPU processor cores to parallelize the interaction analysis. Citation: Chikkagoudar, S., Wang, K., & Li, M. (2011). ...
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  • 3
    DeDAY

    DeDAY

    MLE survival analysis: Gompertz, Weibull, Logistic and mixed morality.

    DeDAY (Demography Data Analyses) is a tool of analyzing demography data. It supports Gompertz, Weibull and Logistic distributions. DeDay also supports mixed mortality models based on these distribution such as the Gompertz-Makeham distribution. Distributions such as Gompertz describes only age-dependent mortality, which increases over time. Mixed mortality models, such as in Gompertz-Makeham distribution, consider a more general case where mortality is consist of both age-dependent and...
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  • 4
    The fast2armc program translates source code of a counter automata model for FAST(er) tool to the ARMC prolog syntax.
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  • 5
    ShiVaSmiles

    ShiVaSmiles

    A slick interface to see various scale analysis algorithms in action.

    The Shape Visualizer is intented to be an exploratory/educational tool making it quick and easy to see how various mathematical methods perform in analysing and selecting the various patterns present on an image. The main website is built as a wiki gathering info and examples on the various implemented algorithms. The combination of the application and its wiki intend to constitute a nice little pedagogic toolkit for multiscale analysis.
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  • 6
    GLUT Complex Function Plotter

    GLUT Complex Function Plotter

    GCFP is an open-source tool for visualizing complex functions.

    GLUT Complex Function Plotter (GCFP) is an open-source tool for visualizing complex functions using OpenGL. It can be customized using LUA. Please note: I wrote GCFP while learning for an exam in complex analysis to understand the behavior of some complex functions. As it has proven useful to me I thought I would share it though obviously GCFP could be improved in many ways..
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  • 7
    T3S Tool

    T3S Tool

    Learning Stochastic Discrete Event Systems

    Stochastic discrete event system analysis and verification are essential in order to ensure reliability in such systems. However, models that cannot be constructed with an hand-made process need to be learned. Thus, the SDES toolbox proposes an automated solution that is embedded in Matlab to learning and analisis generalized semi-Markov processes.
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  • 8
    Lattices and ordered sets visualization tool
    Downloads: 0 This Week
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  • 9
    An application built onto the Open Table Explorer engine for the acquisition and analysis of home energy consumption and solar energy production.Moved to github as Open Table Explorer
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  • 10
    The Tensor Voting Framework is a powerful technique for perceptual grouping, manifold learning, etc. It has proved to be a useful tool in the Computer Vision community. OpenTVF is an open source implementation of TVF.
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  • 11
    Stand-alone software tool for the interactive CE analysis of microarray data. The software is a user-friendly and allows on-the-fly study of CE
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  • 12
    FNA is a command line tool for creating and analyzing financial networks with concepts developed in social network analysis and network science. NOTE: the project has been moved to http://code.google.com/p/financial-network-analyzer/
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  • 13
    Tailorshop: Optimization based Analysis and data Generation tOol. Support tool for the computer test scenario "Tailorshop" that is the basis for many psychological studies. Data can be generated, visualized, and provided to optimization solvers.
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  • 14
    PlexBench is a cross-platform, web-enabled, analysis tool that is driven by a scalable backpropagation feed-forward neural network. It uses embedded Perl for scripting and is written in the style of an in-process Component Object Model (COM) C++ program.
    Downloads: 0 This Week
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  • 15
    Provides: A tool collection for array orientated programming under Linux and Unix operating systems. Main subjects: Handling text- and numeric arrays, mainly stored in shell variables. Furtheron, some useful arithmetic solutions will be provided.
    Downloads: 0 This Week
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  • 16
    The NA_WorkSheet is a set of algorithms coded in Java that implements various Numerical Analysis techniques. The tool may be used for graphing, root finding, differentiation, integration, interpolation, linear systems solving, and matrix operations.
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  • 17
    Draw 2D: function chart, data points chart, statistical bar chart. It's possible to combine all 3 types of chart into one. This is powerfull and easy tool, as it gives ability to manage many charts parameters. This may often compete with Gnuplot and oth
    Downloads: 2 This Week
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  • 18
    The Distributed Real-time Embedded Analysis Method (DREAM) is a tool and method for the real-time verification and performance estimation of distributed real-time embedded (DRE) systems. Publications: http://www.ics.uci.edu/~gabe/publications.html.
    Downloads: 0 This Week
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  • 19
    A code for fast multi-dimensional density estimation . Instead of assuming an a-priori metric definition, it calculates a locally adaptive metric for each data point by using, a Shannon Entropy based, binary space partitioning scheme.
    Downloads: 334 This Week
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  • 20
    yagdt (Yet Another Graph Drawing Tool) is a plugin-based graph drawing application & distributed graph storage engine.
    Downloads: 0 This Week
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  • 21
    Narvik is a tool for conducting numerical and visual analysis in cartography.
    Downloads: 0 This Week
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  • 22
    SurveyForge is a survey definition and execution tool oriented to statisticians running on JEE platform with special emphasis on data entry made easy, use of existing standards (Triple-S, Metanet, DDI) and reuse of standard (or not) classifications
    Downloads: 0 This Week
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  • 23
    Wavefourier is a tool for analysing wave-files with fourier-analysis.
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  • 24
    A tool for proof theorists to study deduction systems and to develop proof search strategies for them. GraPE should eventually support step-by-step proof construction, automatic proof search with various strategies, proof transformations and analysis.
    Downloads: 0 This Week
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  • 25
    Algae is a programming language for numerical analysis. We wrote it because we needed a fast and versatile tool, capable of handling large systems. Algae has been applied to interesting problems in aerospace and related fields for more than a decade.
    Downloads: 2 This Week
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